Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00092 ATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTAGGCATGGATTGGAGTCCTGCGCCTCGAAAATGGAATGGGCGAGATACAGTGTGGCCACACAATCATCATACTGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGCCTTTGTTCCAAAATCAAGGAACTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACAAAGGTCCAAGGAGTCTTAAGAAGGTTCAATGATTTTCTAAAGTTGTTTGCTGATATTAAAAAGGAGTTTCCCAGGAAGAATATCCCTCCAGCGCCACCCAAAGGACTCTTGCGGTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCGTCATTTCTCGAACTAGAAGCAGCTGCAAGATCTTCATTCCAAGACGCAAGCCAGCAGAATTCTGAAACAGACCCCGATTCCAATAACACAGTTTATTCTGTGCAATCACCTCTCCAGTCGAGCTTATCATTAGTTGCTGGCAGTTCATCTGTTGCCTCTGATTATGGTAGTGATACTGCATATGAGCCATCTGACCTAGGAACACCAAGAATTGGACGGGACGATAATTCTGAAGTTGGCACAGATGATCTAACATTAGATGAAGATATGACGAATCCAATAGAAAAGCTTGTGAAATATGGCATATCAAATATTGACGAAGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGTTGCAGAAAAGGAGAAAAATAATGGTAATTTATATGATTCTTCACTTTTAGCTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTTGTTGGTCATGTTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAATTCATCCGTTGATGGCTCTCGTGACCTTCCTAGATCTGCTTTGGTTTCAAGAGACTCGGATATTATGGGCCACACAAAGTCGAAGTCTACTGGTGATACTCAATTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAGCGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTCATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTCCTTGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGGAAATCATTGGAAATGGAGATGAAACTAAAGTCTGAATCGGGAGGAAATTCTTATCAGAATTCGACAAAGGAATCAATTGTTCAGCAGAATGATGTACTGTTGCAAAATCTAGATGATACTAAAGAGCAGCTGGAAATTTTATCGAAACAATATGAAGAGCTAGAAGCAAAATCAAAAGCAGATGTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAATTCCCAAACAAAGTTAAAGAAAGAACTTAGTGAATCGATAAAGGAACATAGCGAAACTGAGAAACAACTACTTCACGAGAGAGAGAAGAGGGAGCAGGCAGAGGCTGCTCGGAGAAAACTGCTGGAGAAATGCAGGCTTCTTTTCAACCAGCTTCAAGAGTGCAATGTCAATCTTCCATATGAATATGAAGATAGGACAAACATGAATTCATCATCATTAACTGATGCTTTTAATCAATTAACAACATCTGATGACCAAATGGACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTGTGGGAGTGCAGCGTCCAGTGTAGATAAAACCAATGGCATAAAAGGTGTAATCTGTGATGACGAAGTGAGAAAGATCATAGCTGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAATCACGTCACAAGACATGCTCTCAAATTGGACATGACAGCAAGTGATGAATCCCCTTCAATGGAAACTGTAACAAGTATTTAG 2160 0.4097 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHNHHTGWSYCVTIPSWAFVPKSRNSDPIVFYRVQVGVQSPEGITKVQGVLRRFNDFLKLFADIKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDISRCAAVASFLELEAAARSSFQDASQQNSETDPDSNNTVYSVQSPLQSSLSLVAGSSSVASDYGSDTAYEPSDLGTPRIGRDDNSEVGTDDLTLDEDMTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANARHVNYVAEKEKNNGNLYDSSLLANNTMELFSEPGHAKVVGHVRKLSNESVGSDGSSIRGSDMSNFGIPNSSVDGSRDLPRSALVSRDSDIMGHTKSKSTGDTQLVLPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESGGNSYQNSTKESIVQQNDVLLQNLDDTKEQLEILSKQYEELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKEHSETEKQLLHEREKREQAEAARRKLLEKCRLLFNQLQECNVNLPYEYEDRTNMNSSSLTDAFNQLTTSDDQMDILLAEVENLEKDCGSAASSVDKTNGIKGVICDDEVRKIIADLFIDNVRLRKQTNHVTRHALKLDMTASDESPSMETVTSI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00092 719 SMART PX_2 55 160 IPR001683 GO:0035091
Pumo10g00092 719 Pfam PX domain 87 158 IPR001683 GO:0035091
Pumo10g00092 719 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Pumo10g00092 719 Coils Coil 429 456 - -
Pumo10g00092 719 MobiDBLite consensus disorder prediction 331 359 - -
Pumo10g00092 719 FunFam Phox (PX) domain-containing protein 46 182 - -
Pumo10g00092 719 MobiDBLite consensus disorder prediction 1 24 - -
Pumo10g00092 719 Coils Coil 500 534 - -
Pumo10g00092 719 MobiDBLite consensus disorder prediction 168 187 - -
Pumo10g00092 719 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Pumo10g00092 719 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 IPR044588 GO:0015031
Pumo10g00092 719 MobiDBLite consensus disorder prediction 557 580 - -
Pumo10g00092 719 Coils Coil 631 651 - -
Pumo10g00092 719 MobiDBLite consensus disorder prediction 207 238 - -
Pumo10g00092 719 Coils Coil 539 601 - -
Pumo10g00092 719 Gene3D - 46 186 IPR036871 GO:0035091
Pumo10g00092 719 MobiDBLite consensus disorder prediction 331 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00092 Pumo-Chr10 1595929 1604599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00092 - - gmx:100792151 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00092 10 1595929 1604599 Pumo10g00092 10 1595929 1604599 ECH