Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00087 ATGCCTCTGAAGCCGTCCTATTCGTCGGAGAATCTGATGCTTCCGGTGTCGGATCCTCCGAACGATGAAAACCGAGAGTGGCTTTTGAAGGCAGATAATGAGACCTTGCGAGGACGGAGAATTTACGCTGCCGTCTCTTACATGTCATGTGCAGTGCTCTTGGTGCTGTTCAATAAAGCCGCTCTTTCGTCTTATCGCTTCCCATCTGCAAGTGTCATCACGCTTCTTCAGATGGTATGTTCATGTTGTTTTCTTTATTTATTGAGGCGCTGGAGGATAATTTCTTTCATAGCAGGCGAATCAGTAATTAGGGCAGATAACTCAAAAGGATTTGTGCCACTGAAGACTTTGAAGCACACTCTTCCTCTGGCAGGAGCATATTTACTTTACATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCTATGTACACCACCCTTAGGAGGACCACTGTGGTATTTACAATGCTTGTAGAATATATGCTGGTGGGGCAGAGGTACTCACCTTCTGTCATTTTCAGTGTTGGCTTGATTGTCTTCGGTGCATTTGTTGCGGGAGCACGGGATTTCTCCTTTGATGCCTATGGCTATGCCATTGTTTTCCTGTCAAACATCACCACAGCTATATATCTTGCAACCATAGCCTGTGTTGGCAAAACTAGTGGCCTTAATAGTTTTGGCCTTATGTGGTGCAATGGTGTCATATGTGGGCCCTTTTTGCTTATCTGGACATTAGTTCGGGGTGACTTGAAGATGACACTCAATTTTCCTTACCTTCTTTCACCTGGTTTTATTGTTGTTTTGCTTTTTTCCTGCATCCTTGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTCAATTCAGCTCTGACACAGACAATATGTGGTAATCTGAAGGATCTATTTACTATTGGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTGTGAGTACTCTTATCCCGACTAACTTTTATCATTTGAGGGTGTTTTCCCTGTTGATAGAATGTGTTGTGTTTTGGTCGCAGTGGAATGTAGTAGGACAACTTCTGGGTTTTGCGGGCTCTGGTTTATATGCCTACTATAAGCTCATCGGCAGATAA 1122 0.4323 MPLKPSYSSENLMLPVSDPPNDENREWLLKADNETLRGRRIYAAVSYMSCAVLLVLFNKAALSSYRFPSASVITLLQMVCSCCFLYLLRRWRIISFIAGESVIRADNSKGFVPLKTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYSPSVIFSVGLIVFGAFVAGARDFSFDAYGYAIVFLSNITTAIYLATIACVGKTSGLNSFGLMWCNGVICGPFLLIWTLVRGDLKMTLNFPYLLSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGFGWIIFGGLPFDFVSTLIPTNFYHLRVFSLLIECVVFWSQWNVVGQLLGFAGSGLYAYYKLIGR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00087 373 Pfam Triose-phosphate Transporter family 51 316 IPR004853 -
Pumo10g00087 373 PANTHER SOLUTE CARRIER FAMILY 35 41 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00087 Pumo-Chr10 1558842 1564098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00087 34 283 Organic Solute Cotransporters AT2G13650 22.957 7.67e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00087 K15281 - gmx:100778544 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00087 10 1558842 1564098 Pumo10g00087 10 1558842 1564098 ECH