Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00080 ATGGATCCAAGCAACCTTTTGCCAGCTGATGGACTTGAAGAAGTCCACCAAAATGGTGTTCATGATAAACTGTCTAATTCTGGAAAGGATGGTGTTGTTTCAAATGTAGACCCTGGTGTTAACAAAATTATAGAAACTGCAGCTCCAAATGGAAATTTTGAAAATTTCATCCAGTATGATAGCACTGCAACTGACTCATCCAAGGCAGAAATCAATGAAGGGTCATATGACAACTTAGATGGCAACAATGTCACCATTTCTAAGGAAGAGGAAGCAGAAATCATAGATCGGACAGAGCAATTAAAAGCAGGAAAAGGTCCTGTCAAGAATAAGAATGCAAAGCCACCAAGCCCCAGAGGAGGCCATGCAAGTTCAGTTAAAAAGAACAAAGATGGAAAGGATGAAGAGGTTGCATCTGCTGTTTCAAATGGTACTTTTGCTTCAGACTCTCACCCAAGACAACCTATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCTAAGCACCCTGGAAAGTCTAACGCAGCACCTTCTGAAGCATCAATGGAGAAGACTAGACCACGATTATTGAAGAAAGTGCCCCTTGATAATCTTCAAGGAGAAACAGAATCTTCTTCTCCTACTGCAGAAGATGCCAAACCTCGCAGGGTGGGGACGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAACCAAGGAGAACCAAGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAGTTAAAAAAGATGCCAACTACAAGAGCTAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACAAATTCAGAGCCAGAAGGAAACACTAGCAACAGTGCTCGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCCAACTAAAGGAATTAGTCCTGTTCATCAAAAGAAGCCACAACGAAAGTCTCTTCCTCCACGACTGACTTCTGAAAAGATCAGTTCATCCAATTCAGCGTCTGCAAGGACCCCATCTAAGGCAGTGAATGGTGACAAAACCTCCTTATCAAGTGTAAAAACTGAAGTTACCACTCTATCCAATGCAACAGGGGAAGAGAAAGTTGAAATAGCTGCAGCCACTGAAGAGAACAATGTCTTATTGGATGAGACAAGTAAAGCTCTTCCTCTGAATGTAGAGCAAGGTGAAACAGAATTTCCTGTGAATAGTGATTTAGTCATTGAAGAGAAACCACAGCTCAACTTGGCACGAGAACCCATAGCGGCGGAGCACTAA 1413 0.4253 MDPSNLLPADGLEEVHQNGVHDKLSNSGKDGVVSNVDPGVNKIIETAAPNGNFENFIQYDSTATDSSKAEINEGSYDNLDGNNVTISKEEEAEIIDRTEQLKAGKGPVKNKNAKPPSPRGGHASSVKKNKDGKDEEVASAVSNGTFASDSHPRQPIKNRSLSDKQARLSKHPGKSNAAPSEASMEKTRPRLLKKVPLDNLQGETESSSPTAEDAKPRRVGTLPNYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKTKENQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVELKKMPTTRAKSPKLGRKKSSTNSEPEGNTSNSARQGRLSLDEKVSQTNPTKGISPVHQKKPQRKSLPPRLTSEKISSSNSASARTPSKAVNGDKTSLSSVKTEVTTLSNATGEEKVEIAAATEENNVLLDETSKALPLNVEQGETEFPVNSDLVIEEKPQLNLAREPIAAEH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00080 470 MobiDBLite consensus disorder prediction 156 170 - -
Pumo10g00080 470 Coils Coil 242 272 - -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 314 353 - -
Pumo10g00080 470 PANTHER PROTEIN WVD2-LIKE 4 96 440 IPR044833 GO:0008017
Pumo10g00080 470 MobiDBLite consensus disorder prediction 63 226 - -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 63 83 - -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 141 155 - -
Pumo10g00080 470 Pfam Targeting protein for Xklp2 (TPX2) domain 227 298 IPR027329 -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 84 104 - -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 367 406 - -
Pumo10g00080 470 MobiDBLite consensus disorder prediction 275 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00080 Pumo-Chr10 1464982 1471669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00080 - - gsj:114408962 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00080 10 1464982 1471669 Pumo10g00080 10 1464982 1471669 ECH
Pumo9g00638 9 11237406 11243322 Pumo10g00080 10 1464982 1471669 PCT