Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00073 ATGGACTTAGAAGGAAGTGAAAAGGATTCAGTGGTTACTCAGATTAGCATCGGTGGATTTGACAGTGAGGTCAAAGCAAGTGATCTCGTGAAGTACTTGGAGGATAAAATTGGACTTGTATACAGATGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCATTGATACTGCAAAGATTAGAAGAACAGATGACTATAAGAAGGTGGCGCCCCATGCCTTTGTGCATTTTGCATCTCCGGAATCTGTGACTGCAGCCCTGAATGCTTCAGGTTGTTGTGATCTATTTTTGAAGAATCAAGCCTTAAAGGTCAGCTGCGGGCCTGAAAATCCATACTTCCTGAACCAAAGGAGGAGAACTAAAACTCCTTTTAAGATGTCTGATGTACTTGTTGAAATTGGGACTTTGGTTAGCCCAGGGAAGTTTTTTGTTGCTTGGAGAGGACCTGATAAAGGTGTAAAATTTCTAGTGGATCCTTTTGATGGCATGTGCAGGTTTTGTTTCAGTAGAGATACTGCATTCTCATTCAAAGGAATAGAAAAAAAAGCAGTGATAAAGTGTGATTTTCAGGTGGGATTTCTGGTTAGAGACATTAATGAGATCAGGAGATATAATGATACATCGTATTTTGTTGTTTTATTACACCTAGCTTCTTCACCATGGGTTTGGTACAGAACTGCTGATGATGACATTGAAGAATCAGTACCATTTGATTTGCTGGATGATGATGATCCTTGGATTAGAACCACTGATTTTACACCTAGTGGGGCAATTGGTCGATGCAATTTTTATAAAATTTCAATCCCGCCTCGCCATGGTGCAAAATTGATGAAGGCCATGCTTTATCTGAAAGGTCAAAGAGTGCAAATGCAAGAACTTCCACTTAAACAGACACTTAGGACACTGAATGAACCTGATTTTGGCATGCCCGTGTCAGATGCTTTCTTCTATATACATTTTCAGAAGGACATTGCTTTTGACATAATGTTTTTGGTCAATGCTATTGTACATAAAGGCATATTTAATCAGCACAGTTTGTCGGATAAGTTTTTTGAATTGCTGAGAAATCAACCTAAGGAGCTCAATGTGGCTGCCCTGAAGCATTTATGTTCTTACAAGCGCCCAGTATTTGATGCAACTGGGAGGCTAAAAATAGTCCAAGAATGGTTGCTCAGAAATCCAAAACTTTATGAGATCTCTAAACAGTTGGATGATATTGTTGAGGTTAGAAGATTGGTTATTACTCCTTCAAAAGCCTATTGTATACCTCCTGAAGTTGAATTGTCCAACAGGGTTCTCAGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAGACAATTAATGTGAATGGTCTTAACTATTTTGTTGCTCCTATAGTGAAGGAAATCACATCAAACTCTTTCCCTCAAAAGACAAGAATATATAAAAGGGTGAAGACTATCTTGGAAGAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCATCCAATCAACTTAGAGATAGATCTGCTTGGTTTTTTGCTGAAGAGAAAATAAGATGTGATGATATACGAAATTGGATGGGCAAGTTTAATCAGAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAATGCTTCTCATCTACTTATGCAACAGTTGAAGTTGCTGCAAATGAAGTTAACTCCATGCTACCTGATGTTGAGAGGAACAATTACATTTTCTCTGATGGTATTGGTATTATCACTCCTGATCTTGCAAGGGAAGTTGCAGAAAAATTGAAATTGGACAATGTACCCTCTGCTTACCAGATCAGATATGCTGGTTTTAAAGGGGTTGTAGCCTCTTGGCCTGCTAAAGGGGATGGGGTCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCAACTCATACTATCTTGGAGATCTGTGCTTGGACCAGGTTTCAGCCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCACTGGGTGTGCCTGATGAAATATTTTGGCAAATGCAGGAGGCAATGCTTTTGAAGTTAAATCAAATGCTTGTGGATGCAGATATCGCTTTCGATGTTCTTACCAAATCATGTGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCCCTAACAGAACCTCATCTTAGAGGTATGTTAACTTCTACACGTGCTGCGCAGCTTTGGGGACTAAGAGAAAAGTCCAGGATTTTTGTATCATCTGGGCGATGGTTGATGGGTGTCTTAGATGAGTCGGGCGTGCTTGAACATGGGCAGTGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCATGGCTCAAGATTTTCAGAGACAAAGAACCTGCATGTAGTTAAAGGTTTTGTGGTTATAGCCAAAAATCCTTGTCTTCATCCAGGAGATGTAAGAGTTTTGGAAGCAGTTGATTCCCCCGATTTACATCATTTATATGATTGCCTTGTTTTCCCTCAAAAGGGTGACAGACCTCATACAAATGAAGCTTCTGGAAGTGACCTTGATGGGGATCTATATTTTGTCACATGGGATGAAAATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGCAGTATGCCCCTCAAGAAAGCAAACTTCTGACACGTCAAGTCATGACCCGAGACATCATAGAATTTTTTGTCCGAAACATGGTAAATGAACATTTGGGTGCAATCTGCAATGCGCATGTGGTACATGCTGATTCCAGTGACTATGGTGCCTTGGATGAGAAATGCATACACTTGGCCGAGCTAGCAGCCACTGCTGTTGATTTTCCAAAGACCGGGAAGCTTGTCACTATGCCTCCTCATCTGAAACCAAAATTGTACCCTGATTTCATGGGGAAAGAGCAGCACCAGTCTTACAAGTCAAAGAAAATCCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCACCCTATTTAAACTTCAGGACTGGTGATATACCATATGATAAAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGCTGATGCGTGGGAGCAAAAATGCTCATATGACGGCCAGTTGAGTGGGCTACTTGGTCAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATCTGGTCCATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTTAAGGAGAGGCTGAAGCACTCATACAGTGCCCTGAAAAAAGAATTTAGGCACACTTTTGAGAAATTGAATTCAGATGTCGGAGAACTAAGCGAGGAAGAAAAAAACATGTTGTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTGAATGGGTGAAAAAATCCCTTGATAAGCAAGATAAATCCCCTGAGAACCAAGAGGCTGATGGTTTAGGAAGTACGGTGATGTTGAGTTTTCCTTGGATTGCTGTTGATTACCTAGCTCGCACAAAGATAAGGCAACGGCATAAGAGATTTGGAAATTTTGATTCAACTAAGCCAGTTGATTCTCTGGCAAAGTATCTAGCTGAAAGGTTATAA 3615 0.4044 MDLEGSEKDSVVTQISIGGFDSEVKASDLVKYLEDKIGLVYRCRLKTSWTPPESYPEFNIIDTAKIRRTDDYKKVAPHAFVHFASPESVTAALNASGCCDLFLKNQALKVSCGPENPYFLNQRRRTKTPFKMSDVLVEIGTLVSPGKFFVAWRGPDKGVKFLVDPFDGMCRFCFSRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIRRYNDTSYFVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKGQRVQMQELPLKQTLRTLNEPDFGMPVSDAFFYIHFQKDIAFDIMFLVNAIVHKGIFNQHSLSDKFFELLRNQPKELNVAALKHLCSYKRPVFDATGRLKIVQEWLLRNPKLYEISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNGLNYFVAPIVKEITSNSFPQKTRIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEKIRCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVAANEVNSMLPDVERNNYIFSDGIGIITPDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGVRLSLRPSMNKFQSTHTILEICAWTRFQPGFLNRQIITLLSALGVPDEIFWQMQEAMLLKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEHGQCFVQVSTPSLENCFSKHGSRFSETKNLHVVKGFVVIAKNPCLHPGDVRVLEAVDSPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYAPQESKLLTRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEQHQSYKSKKILGRLYRRIKDAYDEDIDAPYLNFRTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNMLYEQKASAWYQVTYHPEWVKKSLDKQDKSPENQEADGLGSTVMLSFPWIAVDYLARTKIRQRHKRFGNFDSTKPVDSLAKYLAERL 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00073 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 11 1200 IPR007855 GO:0003968
Pumo10g00073 1204 Pfam RNA dependent RNA polymerase 420 999 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00073 Pumo-Chr10 1395268 1401596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00073 K11699 - gmx:100795178 2371.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00073 10 1395268 1401596 Pumo10g00073 10 1395268 1401596 ECH