Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00067 ATGAAGCTCTTTCTCTTTGTAATCTTTTCAAGCCTATTGCTCAAACAATTGAGCCTAGTTCTTGGAGACGTTGGTACTGCTGCTTCTTATGGACCACCATACATACCTACTGATTGCGATGGGAATAGGCCAGGGCAGTTTCCTCCGGGGAATCTATTTGTGGCTGTGAATGAAGGGTTATGGGATAACGGAGCAGCCTGTGGAAGGAGATACAGAATAAGGTGTGTGAGTGGAAACAATAGACCATGCAAAGGTGGCAGTATTGATGTTAAGGTGGTAGATTCCTGTCAAAGGTCACCATGTCCCAACACCCTCCTCATGTCAAATGATGCCTTTGCAGCTATTTCACGCTTCCCTCATGCAAAAATCAATATTGAATATACCCAGCCCTCGTTTCCCAACTTTTTACTCTTTAGAGGAAATCAAACTGATTATGCGAATAAGCAGAGAGGTGCACGCGCAATCTCAAAGCAAGATATCCCAAAGAAAATGAAGATATGCGGAAAGAAAGATAAGGACAAGAGGCTCCAGTGCAGCCCCTGA 543 0.442 MKLFLFVIFSSLLLKQLSLVLGDVGTAASYGPPYIPTDCDGNRPGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNRPCKGGSIDVKVVDSCQRSPCPNTLLMSNDAFAAISRFPHAKINIEYTQPSFPNFLLFRGNQTDYANKQRGARAISKQDIPKKMKICGKKDKDKRLQCSP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00067 180 Pfam Lytic transglycolase 55 127 IPR009009 -
Pumo10g00067 180 CDD DPBB_EG45-like 23 128 - -
Pumo10g00067 180 Gene3D - 23 129 IPR036908 -
Pumo10g00067 180 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 127 IPR007112 -
Pumo10g00067 180 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 129 - -
Pumo10g00067 180 SUPERFAMILY Barwin-like endoglucanases 21 129 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00067 Pumo-Chr10 1300081 1304104 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00067 - - gmx:100792215 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00067 10 1300081 1304104 Pumo10g00067 10 1300081 1304104 ECH