Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00065 ATGCAGATAAGCAACTTTGCCAGTATGTGGTTCATTCTTCTCTTCGTCTCCATTTTCACCACTTCAATTCTTGAGCTTAGGTGGAGTGGGGTCAGTATAGAAGACTGGTGGAGAAATGAACAATTCTGGGTTATCGGTGGGACATCTGCGCATCTCTTTGCTGTGTTCCAGGGGCTTCTAAAAGTGCTTGCTGGGATCGATACAAATTTTACTGTTACATCAAAGGCATCAGATGAGGATGGGGACTTTGCTGAGCTTTACGTGTTTAAATGGACATCACTTCTCATCCCTCCTACAACGGTGCTTATTGTGAATTTAGTAGGTATTGTGGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAGTCTTGGGGTCCACTATTTGGAAAGCTGTTCTTCGCTATCTGGGTCATTGCCCATCTATACCCATTCTTGAAGGGTCTCTTGGGAAGGCAAAATCGTACTCCAACCATTGTTATTGTTTGGTCCATTCTTCTTGCTTCAATATTCTCCTTGCTGTGGGTGAGGATTGATCCCTTCACCTCTGACTCCAACAAATTAACCAATGGTCAATGTGGCATCAACTGTTAG 591 0.4399 MQISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSDSNKLTNGQCGINC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00065 196 Pfam Cellulose synthase 2 186 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo10g00065 196 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00065 Pumo-Chr10 1285916 1286506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00065 2 193 Glycosyltransferase AT2G25540 82.812 3.37e-113 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00065 K10999 - gmx:100798193 399.053