Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00049 ATGTTTGGAGCAGCGGGGGAGGGTATATGGGACAATGGCGCCGCGTGTGGGAGGCAGTATCAGGTGCGGTGCATCAGCGCTGCAGCTCCTAGGACTTGCATTCCTGGCCAGACGATTCAGATCAAGATTGTTGATCGAGCGCAATCATCGGTTTCTAGGCCTTCCGTAGGGGGAACTTCCATGGTCCTCTCCACCACTGCCTTCCAGGCCATCGCAAATGCCTCTGCGTCATTCATTAACATTGAATTCCAGCAGGTTTGA 261 0.5441 MFGAAGEGIWDNGAACGRQYQVRCISAAAPRTCIPGQTIQIKIVDRAQSSVSRPSVGGTSMVLSTTAFQAIANASASFINIEFQQV 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00049 86 Gene3D - 1 86 IPR036908 -
Pumo10g00049 86 Pfam Lytic transglycolase 9 82 IPR009009 -
Pumo10g00049 86 CDD DPBB_EG45-like 1 84 - -
Pumo10g00049 86 SUPERFAMILY Barwin-like endoglucanases 1 86 IPR036908 -
Pumo10g00049 86 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 86 IPR007112 -
Pumo10g00049 86 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00049 Pumo-Chr10 1085880 1090036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00049 - - gmx:100803494 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00049 10 1085880 1090036 Pumo10g00049 10 1085880 1090036 ECH