Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00042 ATGCACTTCACTGACCATTCCCACAAACAATATATATCTATCCTCCACTCCACTCCACTCAAGAGGGTACTACGATTCTGCGAGAGCCAAGAAACAGGCCAACTGAAACAACAAAGATATACAAAAGCAAAGCAAACAGGGTTTAATTTCGATCTTGCTTGTTTTTCAAGTTCTTTCACCCTTTCTTTCCCTTGCCGCTTTCTTGGTCACACCATCATGGAGTCCTTAAAGGGGCAAGAAGGAGAGGAACAAGTAAAGTGCGTGTGGGTTCATGGCCCTATCATCGTAGGAGCAGGACCCTCGGGGCTAGCCGTTGCGGCCTGTCTCTCCCACCACGGCGTGCCTTACGTCATTCTCGAGAGGAGTGACTGCATCACCTCCCTTTGGCAACACAGAACCTACGACCGTCTCAAACTCCACCTCCCCAAACACTTCTGCGAGCTCCCCTTAATGCCCTTCCCCGACAATTTCCCAAAATACCCCTCCAAGGACCAGTTCATCTCCTACCTCAACTCCTACGCTTCACGCTTCCACATCCGCCCCAGGTTCAACCAATCCGTTCAGACCGCTGAGTTCGACCCCGCTTCCGAATTCTGGGTGGTGAGAACCAACGATTTTCAGTACATTTCCCCGTGGCTCGTGGTTGCTACTGGAGAGAATGCCGAGCCCGTGATTCCCTCGATTTCTGGCATCAACAAGTTTCACGGGCCCATTGTTCACACCAGCGTGTATAAATCTGGTTCCGAGTACAAGAACCATAGGGTCTTGGTCATTGGTTGCGGCAACTCCGGAATGGAAGTTAGCTTGGATCTTTGCCGCCACAACGCCAACCCTTACATGGTTGCAAGAAACACAGTACATGTTCTACCTAGGGAGATGTTTGGCTTTTCAACGTTTGGAATAGCTATGGCTCTCTTGAAATGGCTTCCAATAAAGTTAGTAGACAAGTTGCTTTTGGCGGCGGCTAGGTTAATGTTGGGTGACACCGCTCGCTATGGTGTTAGGAGGCCCAAAACGGGACCAATAGAGCTAAAACTAGTAACGGGGAAAACCCCTGTGCTTGATGTTGGACAAGTCGCGCAAATAAGATCCGGTAACATAAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAGTTTATCGATGGACAAGAAAAGGAATTCAGTGCTATAATATTGGCAACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGCTGTGAATCTTTCACGAAAGACGGAATGCCGAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAATGGATTGTATACAGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACTGCATCAGATGCCGTAAAAATTGCTAAAGACATCGCTGATCAATGGATGACCGTTAAGGACAAATCATACCGTAATGGTAATTCCCACATCATCTTGCTCAAGAGTACATAG 1452 0.4814 MHFTDHSHKQYISILHSTPLKRVLRFCESQETGQLKQQRYTKAKQTGFNFDLACFSSSFTLSFPCRFLGHTIMESLKGQEGEEQVKCVWVHGPIIVGAGPSGLAVAACLSHHGVPYVILERSDCITSLWQHRTYDRLKLHLPKHFCELPLMPFPDNFPKYPSKDQFISYLNSYASRFHIRPRFNQSVQTAEFDPASEFWVVRTNDFQYISPWLVVATGENAEPVIPSISGINKFHGPIVHTSVYKSGSEYKNHRVLVIGCGNSGMEVSLDLCRHNANPYMVARNTVHVLPREMFGFSTFGIAMALLKWLPIKLVDKLLLAAARLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFIDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVKIAKDIADQWMTVKDKSYRNGNSHIILLKST 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00042 483 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 90 463 - -
Pumo10g00042 483 FunFam Flavin-containing monooxygenase 93 467 - -
Pumo10g00042 483 Gene3D - 92 464 IPR036188 -
Pumo10g00042 483 SUPERFAMILY FAD/NAD(P)-binding domain 94 357 IPR036188 -
Pumo10g00042 483 SUPERFAMILY FAD/NAD(P)-binding domain 250 457 IPR036188 -
Pumo10g00042 483 PRINTS FAD-dependent pyridine nucleotide reductase signature 93 112 - -
Pumo10g00042 483 PRINTS FAD-dependent pyridine nucleotide reductase signature 254 272 - -
Pumo10g00042 483 Pfam Pyridine nucleotide-disulphide oxidoreductase 94 285 - -
Pumo10g00042 483 PRINTS Pyridine nucleotide disulphide reductase class-II signature 250 274 - -
Pumo10g00042 483 PRINTS Pyridine nucleotide disulphide reductase class-II signature 211 219 - -
Pumo10g00042 483 PRINTS Pyridine nucleotide disulphide reductase class-II signature 92 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00042 Pumo-Chr10 1010853 1013802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00042 K11816 - gmx:100789347 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00042 10 1010853 1013802 Pumo10g00042 10 1010853 1013802 ECH
Pumo9g00673 9 12737100 12739627 Pumo10g00042 10 1010853 1013802 PCT