Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00035 ATGGAAAGTGAGAGTGAGATTATGATGATCCCATGTTTTGATATTTGCAAGGGTGGGGTGGCATTAGAAGAAGGGAGTGAGGAGTGGAAAGAAATGAGCAAAAAAGTGAGAGAAGCGTGTGAGATTCACGGTTGCTTCCTCTTGATGTGTGATGAGATCATCCCCAAGGGTGTACGTGAAGATATGTTTGATGGTATGAAAGCATTGTTTGATTTGGCTGAAGAAACAAAGCAGCAACACATTAGTCCAAAGCCTTATAGGGGCTACAATGGCAGGAACTCCATCATTCCTCTCTGTGAAAGCTTTGGGATCGATGACGTTCCTCTATCAGCTACGGCTGAGGCCTTCACTAACCTCATGTGGCCTCAAGGAAACCCACCTTTTTGTGAGACACTGAAGACCATGAGCTTAAAGATGTTAGAACTAAGTTTCATCGTCCTGAAAATGATTGTGGAGGGTTATGGCCTTCCCCAACATTACATTTCGGATGTTGAAAACATGAAGAGCTCAGGCTATTCACGATTGATCAAATACAAAGTTCCTAAAAGCAATAATGACTTTGAGACTGCCCTGCCATCTCACACCGACAATAGTGCCATAACCATTTTATGCCAACATGAAGTCCAAGGGCTCCAGGTGTTATCCAAAACAAGCAAATGGATTGAATTGGAGATACCCCAAGATGGCTTTGTGGTCATTGTTGGTGATATACTAAAGGCATGGAGCAATGGGAGACTTCATGCAGTGACACACAGAGTGGCGATGAGTGGAGGCAAAGAGAGGTACTCGTTTGGGGTTTTTGCAATGCCAAAGGAAGAGATCGACATTGAGGTGCCCCCTGAGTTAGTGGATGACCAAATTCATCCCCTTCGTTATCGTCCATTCAATTATGGAGAGTACTTCAATTACTTTGTTTCAAATCCCAGAGAAGCTCTTGAAGTGTTTGCAGGAGCTACAATGGCAAGAACTCTATCATTCCTTGCTGTCAAAGCTTTAAGGGTCAAGGATGTTCCTCTCTCAGCTTCGGCTGAGGCCTTCACCAACCTCATTGGCCTCAAGGAAACCTTCCTTTCAGTGAATGAGATTCATGATTGTGTACAAGATAGCATGATCATGAGTTCCTACTTCATAGAACTGAAGGCACTTTGTGATGCATGA 1158 0.4378 MESESEIMMIPCFDICKGGVALEEGSEEWKEMSKKVREACEIHGCFLLMCDEIIPKGVREDMFDGMKALFDLAEETKQQHISPKPYRGYNGRNSIIPLCESFGIDDVPLSATAEAFTNLMWPQGNPPFCETLKTMSLKMLELSFIVLKMIVEGYGLPQHYISDVENMKSSGYSRLIKYKVPKSNNDFETALPSHTDNSAITILCQHEVQGLQVLSKTSKWIELEIPQDGFVVIVGDILKAWSNGRLHAVTHRVAMSGGKERYSFGVFAMPKEEIDIEVPPELVDDQIHPLRYRPFNYGEYFNYFVSNPREALEVFAGATMARTLSFLAVKALRVKDVPLSASAEAFTNLIGLKETFLSVNEIHDCVQDSMIMSSYFIELKALCDA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00035 385 Gene3D - 10 325 IPR027443 -
Pumo10g00035 385 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 300 - -
Pumo10g00035 385 FunFam 2-oxoglutarate-dependent dioxygenase DAO 8 317 - -
Pumo10g00035 385 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 270 IPR005123 -
Pumo10g00035 385 SUPERFAMILY Clavaminate synthase-like 7 307 - -
Pumo10g00035 385 Pfam 2OG-Fe(II) oxygenase superfamily 177 268 IPR044861 -
Pumo10g00035 385 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 91 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00035 Pumo-Chr10 921755 925810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00035 8 300 Glycosyltransferase AT5G59530 25.574 6.57e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00035 - - gmx:100790408 572.778