Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00030 ATGGAGCAAACGCCTCTTGCGGCTTCAATACTGAATGCAACTTTGATGGTTGTTGCATTCGCTCTTATCCAAGAAGCACAAGGAATTGGAATTGGTGTTAATTATGGCACAGTGGCAGACAACCTTCCTCCACCTTCTGAGGTTGCAAAATTCCTATCACAATCCACCACAATCAAGAAGGTGAGACTCTTCGACGCAAACCCGGAAATTCTACACGCCTTTGGTAACACTGGCATAGAGGTAACCATAACCGTCCCCAACGACCAAATCCCCCACATCACAAACTTAACCTTCGCACAACAATGGGTCAAAACCAACGTCCAACCCTTCATCCCCGCAACAAAACTAATCAGAATCCTAGTTGGCAACGAAGTGTTGTCCACCGCCAACAAACTCCTCATCAGCAACCTCGTACCCGCCATGCAAACCCTTCACACAGCCCTCGTGGAAGCATCATTAGACAACAACATTAAAATCTCCACACCACACTCTTTAGGCATTTTGTCAAATTCAAGTCCACCCTCCACCGCCAAGTTCAGACAAGGCTATGACACGCACGTGATCAAACCAATGCTAAACTTTCTCAAAGATGCAAATGCACCATTCATGGTTAACCCGTACCCTTTCTTCGGATGCACTGCCAGCACCCTTGATTATGCACTTTTTCGAACCAACTCAGGTGTCTTTGATGATAACACTAAGCTTCAATACACAAACATGTTGGATGCGCAACTTGACGCTGCTTATTCGGCGTTGAAAGTTTTGGGCTTTGAGGACGTTGAGATTGTTATTGCCGAAACGGGCTGGCCCTCGGTCGGTGACCCGGCCCAAGTTGCTGTTGACCCGAAACTGCTTCTGAGTACAATGGGAATCTCATACGCCACGTCACTTCGGGGGTTGGAACACCTCTCATGCCAAACAGGACTTTTGATACCTATATTTTTGCTTTGTTTGATGAAAATTTAA 966 0.4638 MEQTPLAASILNATLMVVAFALIQEAQGIGIGVNYGTVADNLPPPSEVAKFLSQSTTIKKVRLFDANPEILHAFGNTGIEVTITVPNDQIPHITNLTFAQQWVKTNVQPFIPATKLIRILVGNEVLSTANKLLISNLVPAMQTLHTALVEASLDNNIKISTPHSLGILSNSSPPSTAKFRQGYDTHVIKPMLNFLKDANAPFMVNPYPFFGCTASTLDYALFRTNSGVFDDNTKLQYTNMLDAQLDAAYSALKVLGFEDVEIVIAETGWPSVGDPAQVAVDPKLLLSTMGISYATSLRGLEHLSCQTGLLIPIFLLCLMKI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00030 321 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 276 IPR044965 GO:0004553|GO:0005975
Pumo10g00030 321 Pfam Glycosyl hydrolases family 17 31 276 IPR000490 GO:0004553|GO:0005975
Pumo10g00030 321 Gene3D Glycosidases 30 293 - -
Pumo10g00030 321 SUPERFAMILY (Trans)glycosidases 31 278 IPR017853 -
Pumo10g00030 321 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00030 Pumo-Chr10 875001 876366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00030 31 308 Miscellaneous Gene Families AT3G46570 50.530 6.52e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00030 - - gmx:100795377 498.049