Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00028 ATGCTCAAGCAATTCCTCAGCAAACTCCCTCGCAAGACGCAGAAACCCGACTCGGACGAGTCATGCCGAGCCGACTCGTCGCGCTCGGACGATTCCCCACGCGTCGCCGGCAGAAACACCTGCCCGCCCGGCAGCGGAGGCTCCGCCGCCGCCGCGAAGAAAACATCCTCGTCGGCGGTTTTTCCGGCGAGCACGGTGTCGGTGATTGAACCTCTGGTGCCGTTTAAGGATGTTCCGAGTTCCGAAAAGATGAACCTTTTCGTGAGCAAGCTGAGCCTGTGTTGCGTCACGTTCGATTTCACGGACCCTGGTAAGAACACGGTGGAGAAAGAGGTGAAGAGAAGAACCCTTGTTGAGCTCGTTGATTTTGTGTCCTCTTGTGGGTCCTCTAGATTCGGTGAACCTGCTATTCTCGCTGTGTGTAGAATGTGTGCTATTAATCTCTTTCGCGTTTTCCCGCCAAATTATAGGTCCAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCGTTTGATCCGGCTTGGCCTCATTTGCAGCTTGTGTATGAGTTGCTGCTAAAGTTTATAACCTCAAATTGTCTTGATGCTAAGGTGGCTAAGAAGTACATTGACCATTCGTTTATTTTAAGGTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACCATTCTGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGGAAATCCATTAACAACTTGTTTTATAGGTTTGTGTTTGAGACCGAGAGGCACAATGGGATCGCGGAGTTGTTGGAGATTTTTGGGAGCATAATTAGCGGGTTCGCTTTGCCTTTGAAGGAGGAGCACAAGATTTTCTTATGGAGGGTTTTGATCCCCTTGCACAAGCCCAAGCATATGGCGGTGTACTTCCAGCAGTTGTCTTATTGTGTTACACAGTTTATAGAGAAAGAGCCCAAGTTGGCCAGCATTGTGATAAGGGGGATGTTGAAGTATTGGCCGATAACGAATAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTTGAGGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGATGCTGCATTAACAGCTTGCACTTCCAGGTAGCTGAAAGAGCCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATTGCTCACAACCGACAAGTGATCCTGCCAATCATATTTCCAGCCTTAGAGAAGAATTCTCATGGCCACTGGAGCCAGGCAGTGCTCAACCTAACTCATAACGTGAGAAAAATGTTTGTGGAGATGGATGAGAAGCTGTTCCTGGCTTCTCATTCTCAGTTCAAGGAAGAAGAAGCAATGCTAAACACGGCGGCAGAGAAGCGGAAGGAGGCGTGGAAACAACTAGAGCATGCAGCCAGTCTCCAGCCTGTGATTGGAAATACCCCAGTTTTAGTGTCTCCAATTTGA 1494 0.4826 MLKQFLSKLPRKTQKPDSDESCRADSSRSDDSPRVAGRNTCPPGSGGSAAAAKKTSSSAVFPASTVSVIEPLVPFKDVPSSEKMNLFVSKLSLCCVTFDFTDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFGEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNLFYRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKHMAVYFQQLSYCVTQFIEKEPKLASIVIRGMLKYWPITNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALEKNSHGHWSQAVLNLTHNVRKMFVEMDEKLFLASHSQFKEEEAMLNTAAEKRKEAWKQLEHAASLQPVIGNTPVLVSPI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00028 497 MobiDBLite consensus disorder prediction 10 32 - -
Pumo10g00028 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g00028 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g00028 497 MobiDBLite consensus disorder prediction 1 50 - -
Pumo10g00028 497 SUPERFAMILY ARM repeat 85 477 IPR016024 -
Pumo10g00028 497 PIRSF PP2A_B56 4 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo10g00028 497 Gene3D - 79 480 IPR011989 -
Pumo10g00028 497 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 79 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00028 Pumo-Chr10 857974 860971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00028 K11584 - gmx:100808283 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00028 10 857974 860971 Pumo10g00028 10 857974 860971 ECH
Pumo9g00681 9 12930776 12934605 Pumo10g00028 10 857974 860971 PCT