Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00011 ATGCAGGCCGTGGAAGAAGGTGGCGGTGCCGAGGAGCGAAACGCGCGTTTTGAGGAAAACGATTTGGAGTCGGAAATTTCGAAGTTGCGCGGGCGATGGGAACTCGCTTCTGTTCTCAATTTTTTGGACGTGTTTGGTCCGATACTTGGTAAAGATTTGAAGCTTTCTGCTGAAGATATTGAGATTGGGCTTGTTAAGAATGACGCTTCGCTTGCTCGGCTTCACATTCAACTTTTGAAGGGAATACCACCTGTGAGTAAAACATTGGAGGATTCTGATAAATGGGCGACTTCACTCTGTAAGAAACTGACTATGTGGTGGCCATGGGTTGCCGAGGGGGAGATTCCACTTGTACCATTTAAAGGAGAGGAGATATCCAAGTACAAGGAACTTGATCCATCAGATCGATTACTACTGCTAAAAGCACTCTGTGAAGTTAGAGCTGTGCAACATGATGCAGTGTCATACATCAATGATGGTTTAAAAGAAGGAACCCAAATTTCATCTTTTCGCAAAGATGCCTTAGGAAGAGATGGAACTGGCACATCTTACTGGTATGATGCAACTTCAAAAGGTCAGAGTCACAGATTGTACAGGGAAATTATCACATCAGACTCAATTCCAAAAGATAAGGATGAAGGATGTTTATCGCTCCCCACCATTCAATGGGAAACACTTGCTTCCAATCTTGAAGATTTTTCAAAAGTAGCTGAAAAATTCTCATTCAGCAAGTCTGCTGTGGAAGTTGCTGTTAGCACGAAGCTTCAAAGTGATGCTATTCCTGCTCTTGAAAAGCTTCGGAAGAAGAAAGAAAGAGCAATAAAGCAAAAGCAAAGGCAGGATATGCTGTTAAAAAAAGACTTTCAGAATTCTTATTGTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGCCTATTAGTTATACATTCGAAGCTTATGATCGAACAATGAAGGAGGCAATACAGCTAACAAATAAAAGGAGAAAATCTCCTGTTGCTGAACAAGATAAAACTGGAGGATCAGAAGATAAATCCAACACAAAAGATGTTTCAACAGACAGTGATTCTGAAAGGGGTGTGTTTCCAATATCTGATAGTGATGACGCTGGTTATGAAGTTGAGAATCACGGTAGCAGTGGGGAGGAGGATGGTGTTGATGGTGAGTTGGGCAACTCTGAAGCACCCTCAAGCCATGCAGTTTCTTATCCAAAAGGGGTTCGCTGCAGCAAGCGGTTATCAGGAGTTCCAAGCCACGCTATTTTAGAAAGCAGAGGCTTAACTACAAAGCAAAGATTGAGGCAAAGACCCACCCGCAATTCTGCTATGGAGTCTATGATTGTATCGGATTCAGAGGACGAAGTGCATGAAGCGAAGAGAGATTTGTCTGAGTCTACTTAG 1398 0.4285 MQAVEEGGGAEERNARFEENDLESEISKLRGRWELASVLNFLDVFGPILGKDLKLSAEDIEIGLVKNDASLARLHIQLLKGIPPVSKTLEDSDKWATSLCKKLTMWWPWVAEGEIPLVPFKGEEISKYKELDPSDRLLLLKALCEVRAVQHDAVSYINDGLKEGTQISSFRKDALGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPKDKDEGCLSLPTIQWETLASNLEDFSKVAEKFSFSKSAVEVAVSTKLQSDAIPALEKLRKKKERAIKQKQRQDMLLKKDFQNSYCSGNTRSCRTRRPISYTFEAYDRTMKEAIQLTNKRRKSPVAEQDKTGGSEDKSNTKDVSTDSDSERGVFPISDSDDAGYEVENHGSSGEEDGVDGELGNSEAPSSHAVSYPKGVRCSKRLSGVPSHAILESRGLTTKQRLRQRPTRNSAMESMIVSDSEDEVHEAKRDLSEST 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00011 465 MobiDBLite consensus disorder prediction 369 383 - -
Pumo10g00011 465 PANTHER REMODELING AND SPACING FACTOR 1 21 357 IPR028938 GO:0006355|GO:0031213
Pumo10g00011 465 MobiDBLite consensus disorder prediction 322 355 - -
Pumo10g00011 465 MobiDBLite consensus disorder prediction 448 465 - -
Pumo10g00011 465 Coils Coil 454 465 - -
Pumo10g00011 465 Coils Coil 260 283 - -
Pumo10g00011 465 MobiDBLite consensus disorder prediction 322 405 - -
Pumo10g00011 465 MobiDBLite consensus disorder prediction 430 446 - -
Pumo10g00011 465 MobiDBLite consensus disorder prediction 424 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00011 Pumo-Chr10 615151 619455 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00011 - - tpra:123899543 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00011 10 615151 619455 Pumo10g00011 10 615151 619455 ECH