Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01592 ATGGAGAGCCTCTCATGTATAAAGCATCTGTTTGTGACAGTGTTCCTCTCAGCCGTAGCTGGAGTTATAGTCATGCCAGCCATGACGGATGTCACCATTTCTGCACTCTGTCCTACTGGTCAATTTCAGTGCTCCCTTGCTATTTACCTCTCTGGAATCCAGCAAATGTTGATCGGAGTGGGATCAGTGGCGATGACACCCTTAATAGGAAATTTATCTGACCGGAACGGCAGGAAATCTTTGCTAACGCTTTCTATGACGTTGACCATCATTCCCAGCGTTATATTGGCATACAGCAGAACTACACAGTTTTTTTATGCCTACTATACATTCAAGACTTTCATTGGCATATTAGGTGAAGGCACTGGAACTTGCCTCACACTTGCATACGTGGCAGATAATACTCCGGAAGGGAAACGTGGATCTGCATTTGGAATTCTCGGTGCCGTGAGTTCAACTGCATTTGTCTGTGGAACAGTAGCTTCTCGTTTCCTACCGATGGATACGGCATTTAAGGTGTCTGCAGTATTATCAATGGTCTCAACCGTGTACATGAGAATTTTTCTCAAAGAAAGCATACCTAGTAATGACCTGAGACAGCCGATGTTGAAAGGAGAAGCATGTGTAGTGGAACAAGTTGACACCCACGCACAAATCAAAACACAAGAATTTGGTCTGATAAATCTGCTCAAAACTAGACCAACATTTGGCCAAGCCGCAGTTGTCTCATTCTTCAATGGTCTTTCAGAAGGTGGCATGCAAGCTTCGATTATGTATTTCTTAAAGGCCCGGTTTCACTTCGACAAAAACCAGTTTGCTGATATAATGCTTATTGGCGGCTTGGCAAACACAGTCTCACTGCTCCTTGTCATGCCGCTCTTGGCATCTAGACTGAGAGAGGAAAAGATGCTTTCCATGGGACTGTTAATAGGCTCCATTTCTATGTTTGTGTACAGCATATCATGGGCAGAATGGGTCCCCTACGCCATTGTCGTGTTCTCATTGATCACTACAATAGCGCGCCCAGCGCTGAACAGCATTGCATCAAAACAAGTTGGTCCTCATGAACAGGGAATGCTTCAAGGATGTCTTTCAGGCATTAGTTCCTTAGCAAATATCATAGCTCCATTGATCTTCAGTCCACTGACAGCATTTTTCTTGTCCAACAGAGCGCCAATTTATTTTCCAGGTTTCAGTATAATGTGCCTTGGGATAACACTGATATATTCCAGATCACTAGAGGGAAACCACATGCAACAAGGAAGATCCATTACAACTACAAGGAACAAGCCTATTTCTTCAGTTTCTGGGAACAACGAAGAATGTGAAGGTATGAGGCTGACATTACAACGGTCCTGA 1359 0.4393 MESLSCIKHLFVTVFLSAVAGVIVMPAMTDVTISALCPTGQFQCSLAIYLSGIQQMLIGVGSVAMTPLIGNLSDRNGRKSLLTLSMTLTIIPSVILAYSRTTQFFYAYYTFKTFIGILGEGTGTCLTLAYVADNTPEGKRGSAFGILGAVSSTAFVCGTVASRFLPMDTAFKVSAVLSMVSTVYMRIFLKESIPSNDLRQPMLKGEACVVEQVDTHAQIKTQEFGLINLLKTRPTFGQAAVVSFFNGLSEGGMQASIMYFLKARFHFDKNQFADIMLIGGLANTVSLLLVMPLLASRLREEKMLSMGLLIGSISMFVYSISWAEWVPYAIVVFSLITTIARPALNSIASKQVGPHEQGMLQGCLSGISSLANIIAPLIFSPLTAFFLSNRAPIYFPGFSIMCLGITLIYSRSLEGNHMQQGRSITTTRNKPISSVSGNNEECEGMRLTLQRS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01592 452 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 414 IPR020846 GO:0022857
Pte9g01592 452 PRINTS Tetracycline resistance protein signature 325 345 IPR001958 GO:0022857
Pte9g01592 452 PRINTS Tetracycline resistance protein signature 16 32 IPR001958 GO:0022857
Pte9g01592 452 PRINTS Tetracycline resistance protein signature 300 321 IPR001958 GO:0022857
Pte9g01592 452 PRINTS Tetracycline resistance protein signature 360 383 IPR001958 GO:0022857
Pte9g01592 452 Pfam Major Facilitator Superfamily 10 376 IPR011701 GO:0022857|GO:0055085
Pte9g01592 452 Gene3D MFS general substrate transporter like domains 7 410 IPR036259 -
Pte9g01592 452 CDD MFS_SLC46_TetA_like 10 408 - -
Pte9g01592 452 SUPERFAMILY MFS general substrate transporter 10 415 IPR036259 -
Pte9g01592 452 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01592 Pte-Chr9 36956968 36966765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01592 2 398 Organic Solute Cotransporters AT2G16990 43.614 3.40e-109 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01592 - - gmx:100805770 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01592 9 36956968 36966765 Pte9g01592 9 36956968 36966765 RCT