Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01587 ATGGCAAAACCAGTTTCAATTGAGGTGTGGAACCCAAATGGGAAATACAGAGTTGTCAGCACAAAACCAATGCCTGGAACTCGGTGGATCAATCTCTTGATGGAGCAAGATTGTCGTGTTGAAATTTGTACACAGAAGAAAACAATACTCACGGTCGAAGACATCATAGCCCTGATAGGTGACAAATGCGATGGAGTGATAGGACAGCTGACCGAAGACTGGGGAGAAACTTTGTTCTCTGCCTTAAGTAAAGCAGGGGGGAAGGCTTTCAGTAACATGGCAGTTGGCTACAACAATGTGGACGTCAGTGCTGCAAACAAGTATGGTGTGGCCGTTGGAAACACCCCTGGTGTGCTAACAGAGACAACTGCAGAGCTGGCAGCTTCACTTTCGTTAGCCGCTGCAAGAAGGATAGTTGAAGCAGACGGGTTCATGAGGGCAGGGTTATATGATGGATGGCTTCCTAATCTGTTTGTTGGCAACTTGCTCAAAGGACAGACAGTCGGTGTCATTGGAGCTGGTCGCATAGGGTCTGCCTATGCTAGAATGATGGTTGAAGGGTTCAAGATGAACTTAATTTACTATGATCTTTATCAGGCCACTCGCCTAGAAAAGTTTGTCACAGGCATGTCATGCTCCACCATATGCCAAGCACCTCAAACCTATTCCTTCCAATGTGTTAACATTCTTCATTTTGTTGCTGCAGCCTATGGTCAATTCCTAAAGGCTAACGGTGAAACACCAGTGACATGGAGACGAGCAGAAACAATGGATGTGGTTCTTCAAGAAGCGGATGTTATTAGTCTTCATCCGGTTCTCGATAAAACTACCTATCATCTGATCAACAAAGAAAGGTTGTCGAGGATGAAGAAGGAAGCAATCCTTGTAAACTGTAGTAGGGGACCTGTAGTTGATGAAGCAGCCCTTGTTGAGCACTTGAAAGAGAATCCAATGTTTCGAGTGGGTCTTGATGTCTTTGAGGATGAGCCTTACATGAAACCTGGACTAGCTGACATGAAGAATGCCGTTGTGGTCCCTCACATTGCCTCTGCTTCCAAGTGGACTCGTGAGGGAATGGCAACGCTGGCTGCTTTAAATGTCCTGGGGAAAATCAGAGGGTACCCAGTTTGGTCTGATCCAAATAAGGTGGAACCGTTTCTCAATGAGAATGCTCAGCCTCCTGCAGCATGTCCTAGCATAGTCAATGCCAAAGCCTTGAGTAATGTCACACTTTTAACATTGCTGGGGAACATTGTGAAATTTTGGTCCTCGCCATGTCTTATTTCCTTTTCTAATTGCAGGCTTGCCAGTTTCGAAGCTATAAGCATTTCCTCTACTCAAGCAAAGGCTTGTCTTGCAAGCAAAATAACCGAATAG 1377 0.4546 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLMEQDCRVEICTQKKTILTVEDIIALIGDKCDGVIGQLTEDWGETLFSALSKAGGKAFSNMAVGYNNVDVSAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADGFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTGMSCSTICQAPQTYSFQCVNILHFVAAAYGQFLKANGETPVTWRRAETMDVVLQEADVISLHPVLDKTTYHLINKERLSRMKKEAILVNCSRGPVVDEAALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASKWTREGMATLAALNVLGKIRGYPVWSDPNKVEPFLNENAQPPAACPSIVNAKALSNVTLLTLLGNIVKFWSSPCLISFSNCRLASFEAISISSTQAKACLASKITE* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01587 458 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 196 IPR029752 -
Pte9g01587 458 Gene3D - 118 348 - -
Pte9g01587 458 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 17 376 - -
Pte9g01587 458 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 373 IPR006139 GO:0016616|GO:0051287
Pte9g01587 458 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 16 156 - -
Pte9g01587 458 Gene3D - 18 373 - -
Pte9g01587 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 350 IPR036291 -
Pte9g01587 458 CDD GDH 16 373 - -
Pte9g01587 458 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 251 349 IPR006140 GO:0051287
Pte9g01587 458 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 203 IPR006140 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01587 Pte-Chr9 36924625 36927701 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01587 K15893 - pvy:116108377 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01587 9 36924625 36927701 Pte9g01587 9 36924625 36927701 RCT