Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01350 ATGGAGCTCCGGGGATCATCAGCAAGGGTCTTCCTGGTGCTTATGGTGGTGTCTTTGGTGCCATTGTCTATGGCGAGATTTGTGGTTGAGAAGAACAGCTTGAGGGTGACATCTCCTGAGAAAATTAAGGGTACCTATGATAGTGCAATTGGGAACTTTGGAATACCTCAATATGGTGGCAGCATGGTTGGTACCGTTACTTATCCCAAAGAGAATCAAAAGGGATGTAAAGAATTCGATGAATTTAAGATATCGTTCCAAACGAAGCCTGGTGGTCTTCCCACCTTTGTTTTGGTCGATCGTGGAGATTGTTTTTTCGCTTTAAAGGTGTGGAATGCCCAGAAGGCTGGAGCTTCTGCAGTTCTTGTTGCAGATGATGTTGATGAAGCGTTAATAACCATGGATACCCCTGAAGAGGATGGATCATCTGCAAAATACATAGAGAATATTACAATACCATCTGCACTAATTACAAAAAGCTTTGGTGAAACGTTGAAGAAAGCCATAAGTGAAGGGGAGATGGTGAACGTCAATCTTGATTGGAGAGAAGCTGTTCCGCATCCAGATGATCGAGTGGAATACGAGTTGTGGACCAACAGTAATGATGAATGTGGGGTCAAATGTGACATGTTGATGGAATTCATAAAGGATTTTAAGGGTGCAGCACAGATACTTGACAAAGGAGGTTATACCCAATTTACACCCCATTACATAACTTGGTATTGCCCCCAGGCTTTTACCTTAAGCAAACAATGCAAGTCCCAGTGCATAAATCGTGGAAGATATTGCGCCCCTGACCCTGAGCAGGACTTCAGCAGTGGTTATGATGGGAAAGATGTGGTTACTGAGAATTTGAGGCAGCTTTGTGTATTTAAAGTTGCAAATGAAACCAAGAAGCCTTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAGTATAACAAGGAATGTGCAGATGGTGTTCTTAAATCACTTGGTCTTGACATTAAAAAGATAGAGAACTGCATGGGAGATCCAAATGCCGACACTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCTCAGGTTGGGAAAGGAACAAGAGGTGATGTTACCATATTGCCAACCATTGTTGTTAATAATCGACAATATCGAGGGAAGTTGGAGAAAGGCGCTGTTCTGAAGGCCATCTGCTCTGGCTTTGAGGAAACTACAGAGCCAGCTGTTTGCTTAAGTGGCGATGTGGAAACAAACGAGTGCTTAGATAACAATGGTGGCTGTTGGCAAGATAAAGTAGCGAATATTACAGCCTGCAAGGATACGTTCCGCGGTCGAGTATGTGAATGCCCATTAGTTGATGGTGTGCAGTTTAAAGGAGATGGTTACTCCTCCTGTCAAGCTAGTGGCCCTGGGAGGTGCAAGATAAACAATGGAGGATGTTGGCATGAAGCCAGGAATGGACATGCTTTTACAGCCTGTTCCGATGATGGAAATGTAAAATGCCAGTGCCCTACAGGATTTAGAGGTGATGGTGTCAACAACTGTGAAGATATTGATGAATGCAAAGAAAAGAAAGCTTGTCAATGCGCTGAATGTAAATGCAAGAATACCTGGGGGAGCTACGATTGCACCTGCAGTGGGGATCTTCTGTACATGAAGGACCATGACACATGCATAAGCAAAACTGCCAGCGGGGGTAAATCTGCTTGGACTGCCGTTTGGGTCATTGTGATTGGTTTAGCTATAGCTGCAGGTGGGGCATATCTTGTGTACAAATACAGACTGAGGCGATACATGGATTCTGAAATCCGTGCGATTATGGCACAATATATGCCATTGGACAGCCAAGGAGATGTCCCCAATCATGTCAATGTGGAACGGGCTGGTGGAAGAGATTACGTGTCAGATATCTGA 1917 0.4392 MELRGSSARVFLVLMVVSLVPLSMARFVVEKNSLRVTSPEKIKGTYDSAIGNFGIPQYGGSMVGTVTYPKENQKGCKEFDEFKISFQTKPGGLPTFVLVDRGDCFFALKVWNAQKAGASAVLVADDVDEALITMDTPEEDGSSAKYIENITIPSALITKSFGETLKKAISEGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFIKDFKGAAQILDKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINRGRYCAPDPEQDFSSGYDGKDVVTENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADGVLKSLGLDIKKIENCMGDPNADTENPVLKEEQDAQVGKGTRGDVTILPTIVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDNNGGCWQDKVANITACKDTFRGRVCECPLVDGVQFKGDGYSSCQASGPGRCKINNGGCWHEARNGHAFTACSDDGNVKCQCPTGFRGDGVNNCEDIDECKEKKACQCAECKCKNTWGSYDCTCSGDLLYMKDHDTCISKTASGGKSAWTAVWVIVIGLAIAAGGAYLVYKYRLRRYMDSEIRAIMAQYMPLDSQGDVPNHVNVERAGGRDYVSDI* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01350 638 CDD EGF_CA 518 546 - -
Pte9g01350 638 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 14 618 - -
Pte9g01350 638 FunFam vacuolar-sorting receptor 1 411 467 - -
Pte9g01350 638 Gene3D Laminin 472 555 - -
Pte9g01350 638 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Pte9g01350 638 Gene3D Laminin 411 467 - -
Pte9g01350 638 FunFam Vacuolar-sorting receptor 1 24 188 - -
Pte9g01350 638 Gene3D - 24 188 - -
Pte9g01350 638 CDD PA_VSR 52 179 - -
Pte9g01350 638 SUPERFAMILY PA domain 96 171 IPR046450 -
Pte9g01350 638 Pfam PA domain 64 165 IPR003137 -
Pte9g01350 638 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Pte9g01350 638 SMART egfca_6 518 560 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01350 Pte-Chr9 34887283 34891775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01350 25 629 Miscellaneous Gene Families AT2G14740 84.463 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01350 - - qsa:O6P43_031124 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01350 9 34887283 34891775 Pte9g01350 9 34887283 34891775 RCT