Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01242 ATGGGGGTCGTTTCTCAGGAAGCGATCAACCAGTTGAAGACATTGATGGATCGAGTTGAAGAGCCATTGCAAAGGACTTTTCAGAATGTTCATCAAGGTTATGTAATTGAAACTTTGGCGCGTTTTCTAAAAGCAAGGGAATGGAATGTTGACAAGGCCCACAAAATGTTGGTAGATTGTTTGAACTGGAGGGTGCAAAATGAGATTGACTGCATATTATCTAAACCTATAATTCCTACTGATCTATACAGAGACATCCGAAATTCACAGCTTATAGGCCTGTCAGGTTACTCCAAAGAGGGTCTGCCTGTCTTTGCAATTGGAGTTGGTCTCAGCTCATTTGATAAAGCATCTGTTCACTATTATGTGCAGTCCCACATTCAAATTAATGAATATCGAGATCGTGTAGTTTTGCCTTCTGCATCAGAGAAACAAGGACGACCTATTACAACCTGTATAAAAGTCTTAGACATGACCGGCCTGAAGCTTTCAGCCCTTAGTCAGATCAAGCTATTAACAATCATATCAAGCATTGATGACTTGAACTACCCCGAAAAGACAAATACATACTACATAGTTAATGCTCCGTACATCTTTTCAGCTTGTTGGAAGGTAGTAAAACCTCTTTTACAGGAAAGAACAAGGAAAAAAGTGCAGGTGCTGTCAGGTTGCGGGCGAGATGATTTGCTGAAGATCATGGATTATGCATCTCTCCCACATTTCTGTAGAAAGGAAGGATCTGGATCATCACTACATTCAGATAGTGGGACTGAGAACTGCTTTTCCTTGGACCATCCCTTCCATCAAAATCTCTACGATTACATCAAGCAGCAATCTGCAGTCTGTGATCCTACTGTACCTATTAAGCAGGGATCGTTCCATGTTGATTTTCCTGAACCTCCTGAAGAGGAAATTGAGATTGCAAGGACCATAGAATCTGAGCTCCACAAGTTTGAGAATGGTAATGAGGTTTCTCACTCGCTTGATGGGCTTAAAATCAATAATGATTGA 1011 0.4095 MGVVSQEAINQLKTLMDRVEEPLQRTFQNVHQGYVIETLARFLKAREWNVDKAHKMLVDCLNWRVQNEIDCILSKPIIPTDLYRDIRNSQLIGLSGYSKEGLPVFAIGVGLSSFDKASVHYYVQSHIQINEYRDRVVLPSASEKQGRPITTCIKVLDMTGLKLSALSQIKLLTIISSIDDLNYPEKTNTYYIVNAPYIFSACWKVVKPLLQERTRKKVQVLSGCGRDDLLKIMDYASLPHFCRKEGSGSSLHSDSGTENCFSLDHPFHQNLYDYIKQQSAVCDPTVPIKQGSFHVDFPEPPEEEIEIARTIESELHKFENGNEVSHSLDGLKINND* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01242 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 79 239 IPR001251 -
Pte9g01242 336 Pfam CRAL/TRIO domain 89 241 IPR001251 -
Pte9g01242 336 CDD SEC14 83 241 IPR001251 -
Pte9g01242 336 Pfam CRAL/TRIO, N-terminal domain 32 59 IPR011074 -
Pte9g01242 336 SMART sec14_4 83 247 IPR001251 -
Pte9g01242 336 SUPERFAMILY CRAL/TRIO domain 81 242 IPR036865 -
Pte9g01242 336 SUPERFAMILY CRAL/TRIO N-terminal domain 10 76 IPR036273 -
Pte9g01242 336 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 328 - -
Pte9g01242 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Pte9g01242 336 Gene3D - 3 280 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01242 Pte-Chr9 34021888 34026778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01242 1 336 Acyl Lipid Metabolism Gene Families AT5G47730 74.107 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01242 K26544 - qsa:O6P43_012055 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01242 9 34021888 34026778 Pte9g01242 9 34021888 34026778 RCT