Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01199 ATGGCCTGTGAGAAACGATTGGGAATTGGAAGTCCAATATTTGACTTGGTTTTTGTTTTCCTAGAGCATATAAATGATGCTTACCGGTCGCCATCCTCTGGGAAGATCTATTGTTTGTTGCTGAAGGCCTTCTACTCGTGCATACGTGATTACTTTGCAAGTTATGCTATTGTTTTATATAATTTTACTATGGCAGGAGAGGAAGAGAAGGGCCGGCCATTGCCAAAATTTGGTGAATGGGATGTGAATGATCCGGCTTCAGCTGAGGGATTCACTGTGATTTTTAACAAGGCTAGGGATGAGAAAAAGACAGGCGGCAAACCTGATTCACCTGGAAAGGTTGATTCTCATAACAGGCCTGCATTAGACTCTCAAAAAGCTCCCAGTAAAAAATGGTTTTGCTGCATTCAGAACCCTCCAGCAGAATCTTGA 432 0.4259 MACEKRLGIGSPIFDLVFVFLEHINDAYRSPSSGKIYCLLLKAFYSCIRDYFASYAIVLYNFTMAGEEEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPDSPGKVDSHNRPALDSQKAPSKKWFCCIQNPPAES* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01199 143 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 69 104 IPR008700 -
Pte9g01199 143 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 66 134 IPR040387 -
Pte9g01199 143 MobiDBLite consensus disorder prediction 97 120 - -
Pte9g01199 143 MobiDBLite consensus disorder prediction 97 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01199 Pte-Chr9 33740264 33742647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01199 - - lja:Lj2g3v3303460.1 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01199 9 33740264 33742647 Pte9g01199 9 33740264 33742647 RCT