Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01198 ATGTCTCTGGGCTATGCCGAGAAGCTTTCTTATATAGAAGATGTGGGCAATGTTGGAATGGCCGAACACTTTGACCCACCACTCGTTTTGCGAGAAAAAAGTAAGCATCTAGTAGTGTTTACAGGAGCAGGAATATCAACTTCTTCAGGCATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGAAAACCCTTACCTGAAGCATCACTGCCATTTCACCGTGCAAGGCCAAGCTTGACTCACATGGCTTTGGTTGCATTAGACAAGGCTGGTGTACTAAAGTTTGTTATTAGTCAGAATGTTGACGGTCTTCACTTGCGATCTGGAATACCAAGGGAAAAGATGTCTGAGCTGCATGGGAACTCTTTCATGGAAACTTGTCCTTCTTGTGGCAATGAGTATATGCGGGATTTTGAGGTGGAAACTATTGGTCTGAAGGAGACCTCAAGGCGATGTTCAGATGAACAATGTGGAGCAAGACTCAGGGACACAGTTCTTGATTGGGAGGATGCATTGCCTGACAAGGAGATGGATGCTGCTGAGAAGCACTGTCAGATGGCTGATATTGTATTATGCTTGGGAACAAGTCTACAAATAACACCTGCATGCAACCTTCCTCTTAAAGCGCTTCCCAGTGGGGGGAAAATGGTGATTGTGAATCTTCAGAAAACTCCAAAGGATAGAAAGGCTAGTTTGGTGATCCATGGGCTAGTAGACAAGGTAATTGCAGGCATCATGGACATAATGAATCTGCAGATCCCACCTTTTGTCAGGATTGATCTTTTCCAAATATTTATGACTCAAGGGTTGAGCTTTGATAAACGATATATAAACTGGACTCTCCAGATAGGGAGTGTCCATGGACAAAAAGCTGCATTGCCGTTCATCACTTCTGTTGAGGTATCATTCTCAGACAATCTAGAATATAAAGCAGCCATTGTGAAAAAGCAACCTTTTCGGCTGAAAAGAACCTTGAAGGCCAAATCATTTGAAATTGCTCTGAAACTCAACTTCAGTGACGGCTGTGGTTGTTCAAGTGTTGAAATTGTTGTCCCTGTTGATTTTGAGGAATCATCTGATGGTTTTGAGATGGATAAAAATGTAGTATTTCAAAAGCTGAGAGATGGGGCTATTCAAGAATCAAGCTGTGGGCAATATGCCTTCATCGAGAGAAAGAGCATCTTGACACCCAGAGGTGATGTCACTGTGTACGCTATTGTGACTAATGTCCTTGAGTACAGT 1257 0.4312 MSLGYAEKLSYIEDVGNVGMAEHFDPPLVLREKSKHLVVFTGAGISTSSGIPDFRGPKGIWTLQREGKPLPEASLPFHRARPSLTHMALVALDKAGVLKFVISQNVDGLHLRSGIPREKMSELHGNSFMETCPSCGNEYMRDFEVETIGLKETSRRCSDEQCGARLRDTVLDWEDALPDKEMDAAEKHCQMADIVLCLGTSLQITPACNLPLKALPSGGKMVIVNLQKTPKDRKASLVIHGLVDKVIAGIMDIMNLQIPPFVRIDLFQIFMTQGLSFDKRYINWTLQIGSVHGQKAALPFITSVEVSFSDNLEYKAAIVKKQPFRLKRTLKAKSFEIALKLNFSDGCGCSSVEIVVPVDFEESSDGFEMDKNVVFQKLRDGAIQESSCGQYAFIERKSILTPRGDVTVYAIVTNVLEYS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01198 419 Gene3D - 125 174 - -
Pte9g01198 419 FunFam NAD-dependent protein deacetylase SRT1 125 174 - -
Pte9g01198 419 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 28 124 - -
Pte9g01198 419 SUPERFAMILY DHS-like NAD/FAD-binding domain 33 281 IPR029035 -
Pte9g01198 419 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 31 255 - -
Pte9g01198 419 ProSiteProfiles Sirtuin catalytic domain profile. 13 257 IPR026590 -
Pte9g01198 419 Pfam Sir2 family 42 64 IPR003000 GO:0070403
Pte9g01198 419 Pfam Sir2 family 77 206 IPR003000 GO:0070403
Pte9g01198 419 CDD SIRT7 35 242 - -
Pte9g01198 419 Gene3D - 32 251 - -
Pte9g01198 419 Gene3D YEATS domain 271 377 IPR038704 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01198 Pte-Chr9 33699022 33711073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01198 K11416 - qsa:O6P43_021309 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01198 9 33699022 33711073 Pte9g01198 9 33699022 33711073 RCT