Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01178 ATGGCTGTGTCTTCCATTTCTGCAACAATTTTTCCTTCTCTTTCGCTCACGAGTTCCTCTTCGCGTTATTCTACACCAAAGTTCGCATCTTTGTTAGCGCCCTCTGTCTGTACCTTGAAGCTCAAGACCGCTAAAGCTCTTCACTCTCCCACTAAAGTTTTCGCTGCTCCTGAAGCGCTGGATTCCATAGAAACCCTAGAGCCACCTGTAGAGACCTTTGATGAATCTGAATCATCCACTTACGAGGTCGCGGAACTGGGGAGTACGAGCACTGCATCACTAGCCATTGGGTCTGATGCTGAAAAGATGGTTGCAAAGCAGAAAATTAGAATCAAACTTAGATCTTATTTCGTGCCCCTAATAGAGGATGCGTCAAAGAAAATATTAGACGCTGCAAGGAGTACCAATGCCAAAACCATGGGTCCTGTGCCATTACCAACAAAGAAGCGTGTATATTGTCTCCTGAATTCTTCATTTGTGCATAAGGATTCAAGGTTTGTGTTTGAAATCAGAACTCATCAGCGCCTTATCGATATTATACATCCAACTGCTCAAACAATAGATGCGTTGATGCTGCTTGACCTACCTGTTGCTGTTGACGTAGAAGTCAAGCTGTAA 618 0.4401 MAVSSISATIFPSLSLTSSSSRYSTPKFASLLAPSVCTLKLKTAKALHSPTKVFAAPEALDSIETLEPPVETFDESESSTYEVAELGSTSTASLAIGSDAEKMVAKQKIRIKLRSYFVPLIEDASKKILDAARSTNAKTMGPVPLPTKKRVYCLLNSSFVHKDSRFVFEIRTHQRLIDIIHPTAQTIDALMLLDLPVAVDVEVKL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01178 205 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 33 205 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 FunFam 30S ribosomal protein S10 106 205 - -
Pte9g01178 205 Pfam Ribosomal protein S10p/S20e 110 204 IPR027486 -
Pte9g01178 205 Hamap 30S ribosomal protein S10 [rpsJ]. 106 205 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 ProSitePatterns Ribosomal protein S10 signature. 132 147 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 PRINTS Ribosomal protein S10 family signature 108 121 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 PRINTS Ribosomal protein S10 family signature 143 158 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 PRINTS Ribosomal protein S10 family signature 164 178 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pte9g01178 205 SMART Ribosomal_S10_2 110 204 IPR027486 -
Pte9g01178 205 Gene3D Ribosomal protein S10 domain 96 205 IPR036838 -
Pte9g01178 205 SUPERFAMILY Ribosomal protein S10 108 205 IPR036838 -
Pte9g01178 205 NCBIfam 30S ribosomal protein S10 107 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01178 K02946 - qsa:O6P43_021290 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01178 9 33422932 33426067 Pte9g01178 9 33422932 33426067 RCT