Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01177 ATGGGTCCCAGAACGATGAATCTGACAAAGAATCTTCATACGCGTACTGTTGTGGAAGATGTCGATCAGAGGGAAAATACCGACGAAGGTGATATATGGTTCAAGATGCAAAATGAAGCTAGGTCAGATGTTGAAAAGGAACCCATATTGTCTAGTTACTATTATACTTCGATTTTGGCTCACAAATCATTAGAAAGTGCGCTAGCCAATATTCTCTCTGTCAAATTAAGCAATTCAAGCCTTCCTAGCGGGACTCTCTTTGATATATTCATGGGGATTCTCGTGGCAGATAGAGAAATTGTTTCGGCCGTTAGAGATGATGTAAGAGCTGTGGAAGAGAGAGACCCTGCATGCGTTAGTTATGTGCATTGTTTCTTGAATTACAAAGGTTTTTTGGCATGTCAAGCACATAGGGTGGCACATAAATTGTGGTCGCAGGGTAGGAAAGTTTTGGCCCTCTTGATTCAGAATAGAGTATCTGAAGTTTTTGCAGTAGACATTCACCCGGGAGCTAAAATCGGAAGTGGGATTTTGCTTGATCATGCCACGGGAGTTGTGGTGGGAGAGACTGCTGTGATTGGGAACAATGTGTCAATTTTGCACAATGTAACATTGGGAGGAACGGGTAAGGCCAGTGGCGATAGGCATCCTAAAATTGGCGATGGAGTATTGATCGGTGCAGGGACTTGTATTTTGGGGAACATCAGAGTTGGTGATGGAGCCAAAATTGGTGCTGGTTCAGTGGTACTGAAGGATGTTCCACCTAAGACTACTGCTGTTGGAAATCCAGCAAGGTTGATTGGAGGGAAAGACAATCCTATCAAGCTTGACAAGATTCCCAGTTTTACCATGGACCATACATCCCATATTTCTGAGTGGTCTGACTATGTCATATAG 897 0.4337 MGPRTMNLTKNLHTRTVVEDVDQRENTDEGDIWFKMQNEARSDVEKEPILSSYYYTSILAHKSLESALANILSVKLSNSSLPSGTLFDIFMGILVADREIVSAVRDDVRAVEERDPACVSYVHCFLNYKGFLACQAHRVAHKLWSQGRKVLALLIQNRVSEVFAVDIHPGAKIGSGILLDHATGVVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIRVGDGAKIGAGSVVLKDVPPKTTAVGNPARLIGGKDNPIKLDKIPSFTMDHTSHISEWSDYVI* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01177 298 SMART SATase_N_2_a 32 136 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pte9g01177 298 Gene3D Hexapeptide repeat proteins 166 285 - -
Pte9g01177 298 NCBIfam serine O-acetyltransferase 104 265 IPR005881 GO:0005737|GO:0006535|GO:0009001
Pte9g01177 298 PANTHER SERINE ACETYLTRANSFERASE 16 298 - -
Pte9g01177 298 Pfam Bacterial transferase hexapeptide (six repeats) 216 250 IPR001451 -
Pte9g01177 298 FunFam Serine acetyltransferase 166 292 - -
Pte9g01177 298 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 225 253 IPR018357 GO:0016740
Pte9g01177 298 CDD LbH_SAT 163 263 IPR045304 -
Pte9g01177 298 Gene3D serine acetyltransferase, domain 1 15 165 IPR042122 -
Pte9g01177 298 FunFam serine acetyltransferase 1, chloroplastic 13 165 - -
Pte9g01177 298 Pfam Serine acetyltransferase, N-terminal 32 136 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pte9g01177 298 SUPERFAMILY Trimeric LpxA-like enzymes 32 268 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01177 Pte-Chr9 33416885 33418590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01177 32 286 Miscellaneous Gene Families AT2G17640 56.863 9.13e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01177 K00640 - qsa:O6P43_021289 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01177 9 33416885 33418590 Pte9g01177 9 33416885 33418590 RCT