Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00430 ATGGCTACAGAAGAAGAAAGCGCAGTGAAGGAGCCTTTGGATCTCATCAGGCTTAGTCTGGACGAGCATATCTATGTCAAGCTCCGTTCTGATCGCGAGCTTCATGGCAAACTCCATGCCTATGATCAGCATCTAACCATGATCCTTGGAGACGTCGAAGAGCTTGTTACAACAGTAGAAATTGATGATGAGACTTATGACGAGATGGTGAGGGCAAGTTTCTCTTTGAATCCTTACTTCTCTAATTTTCAGAGCTCAACCGTCCACTGA 270 0.4519 MATEEESAVKEPLDLIRLSLDEHIYVKLRSDRELHGKLHAYDQHLTMILGDVEELVTTVEIDDETYDEMVRASFSLNPYFSNFQSSTVH* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00430 89 Gene3D - 1 81 - -
Pte9g00430 89 SUPERFAMILY Sm-like ribonucleoproteins 10 70 IPR010920 -
Pte9g00430 89 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 1 73 IPR040002 GO:0003723
Pte9g00430 89 SMART Sm3 14 61 IPR001163 -
Pte9g00430 89 Pfam LSM domain 16 60 IPR001163 -
Pte9g00430 89 CDD LSm3 11 71 IPR034105 GO:0000398|GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00430 Pte-Chr9 5167248 5169741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00430 K12622 - csav:115709368 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00430 9 5167248 5169741 Pte9g00430 9 5167248 5169741 RCT