Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00387 ATGCTTACACTGACATACTTTCCACTGCTCATTACTAAGAGATTGGAATTGGTAATATTTTCAAGGAATACAAGCAGTTTGGTGGTATGTGCTGCAAAAGGTCCAAGACCGAGATATCCCCGCGTCTGGAAAACAAAGCCGAGAATCGGTACCATCTCCAAGGCTGCAAAATTTGTTCAGTGTATAAAGGGGCTATCAAATGTTAAAGAGGAAGTCTATGGGGCTCTTGATTCATTTGTTGCATGGGAGTTGGAATTCCCTTTAATTACAGTGAAAAAAGCATTAAAGACTCTCGAAAATGAAGGAGAATGGAAGCGTATAATTCAGGTGATAAAGTGGATGTTAAGCAAAGGTCAAGGGAGAACAATGGGGAGTTATTTCATGTTACTCAATGCTTTGGCAGAAGATGACAGACTAGATGAGGCTGAAGAGCTTTGGAACAAACTGCTGATGCAAAACCTGGAAAGTTTACCTCGTATATTCTTCGATAAAATGATTTCTATATACTACCAGAGGAGGATGCATGAGAAGATGTTTGAGGTATTTGCGGATATGGAGGAGCTTGGAATCAAACCCGGTATTTCTACTGTTAAAATGGTTGGAAAGGTCTTCCAAAAGCTGGATATGCCGGACAAGTATGAAAAATTAAATAAAAAATATCCTCCACCAAAGTGGGAATATCGATACTACAAAGGAAAGCGTGTAAGAATTAGAGTCAAGAATCTAAATGCATATGATGGTTTTAACGAATATGAGAAGCATGAGGAAAGCAATGGTGACTCGGATGTAGAAGAGCTGGAGGCTACTGAACAAGATTCAGATATAGATGGGTCAAATTCCATTGCCTTTGCTGAATTGCACCAGGATAATGACCCACCTTCTGATGCAAAAAATGAGGAAGGTGACCAAAATTTACTGAAATATGATGTACTACCGAGAAACTCAACCAATGATGTGCATTATGTAGATGATGAATCAAGCACATAG 987 0.3911 MLTLTYFPLLITKRLELVIFSRNTSSLVVCAAKGPRPRYPRVWKTKPRIGTISKAAKFVQCIKGLSNVKEEVYGALDSFVAWELEFPLITVKKALKTLENEGEWKRIIQVIKWMLSKGQGRTMGSYFMLLNALAEDDRLDEAEELWNKLLMQNLESLPRIFFDKMISIYYQRRMHEKMFEVFADMEELGIKPGISTVKMVGKVFQKLDMPDKYEKLNKKYPPPKWEYRYYKGKRVRIRVKNLNAYDGFNEYEKHEESNGDSDVEELEATEQDSDIDGSNSIAFAELHQDNDPPSDAKNEEGDQNLLKYDVLPRNSTNDVHYVDDESST* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00387 328 MobiDBLite consensus disorder prediction 290 306 - -
Pte9g00387 328 Pfam PPR repeat 129 150 IPR002885 -
Pte9g00387 328 Pfam PPR repeat 165 190 IPR002885 -
Pte9g00387 328 PANTHER OS01G0757700 PROTEIN 21 272 IPR044646 -
Pte9g00387 328 NCBIfam pentatricopeptide repeat 163 193 IPR002885 -
Pte9g00387 328 MobiDBLite consensus disorder prediction 252 328 - -
Pte9g00387 328 Gene3D Tetratricopeptide repeat domain 53 220 IPR011990 GO:0005515
Pte9g00387 328 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 158 192 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00387 Pte-Chr9 4491413 4497246 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00387 - - qsa:O6P43_004249 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00387 9 4491413 4497246 Pte9g00387 9 4491413 4497246 RCT