Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00344 ATGGTCTCACAGTACGGTATCAAGCTTGCCGTACACTTGATCACCAATCACTTCGGAAATCTCGTTTCTAAAGTATGTGAAACTCTTCTAAGGAAGGGTGTGATGACTTGGGTGGAATTAGTTAGATTTACTGAACTCACCAAAGAGCAAGTCAAAAACTCGTTACTCGTTTTAATACAACACAATTGCGTTCAAGCTTTTGTTGAAGAACGAGATGCTAGAGATGGTGTAAAAACTTCCACGATGTACCTGGCAGTATTTGATAACATAATTCATCGATTGAGATTTCCCAAGTTCCTGGATATCGTATACCAAGAACTTGATACAGAGGATACAAAGTCTTTACCATGTGGAAAAGTTCTTTCGGGAATACTTAAAGATGGCAGGCTTACACTGAGTCAGATTGTTGACAGATTACGTCATACAGAAGGAAAACATGTTGATGAAAGTCTAGTGAAAGAACGACTTGGTAAACTTCTTGCTGCTCGATATGTTGAACGATGTCCAGCTCCTGATCCTATTTTGCATCCTGTGGCAAAAGAAGAGGGTACTACAAAAAAGCGTGGTGCTAAAGCTGCTAAGGTGGAACATGAAGTTCCAGTGACCCTAGAACAGCGAGTCCTAGCAGCAGCAGTGCCTATGGATGCTATTAGATTTTCACTGGTTTCAATTGTTGATTCTTTTGAGAATACAGGAATTAGTCCGAATAATTCTCCTAAAACAAGTGTCGGAGAAAAGCGCAAGCGTGATGCTTTTGATATGGGCAAAGAATCAAATGCTGCAGGAGATGAATCAACTCCTTGGCGTGCTAACTTTGAGGAGTTTGTTCTCCATCTAAGAGACAAGGCATGCGTTGAGAATGTGAGGACAAGAATGGATGATGGAGCTGCAACTGTATTAAATGCAATCCTTGATAAAAGTAGAACTTCAGAGAAGAAGGTGAAAATTGACAATTCAGTTCCTCTTTCATTGAGCACCATTTTTGAAGAGGTAATGAAAAGTGAAGCTGGTAGAACGATGACGTTAGATCGTGTCAGAGCTTCTCTTGTCCAGTTGGGTTGTCCTCAAAGGATGCCAAATGATTCCTTTAGCATTGATTTGAAAGGTATTATTGAATTAGCTCGAAATGAAGAGGTAGAATCGACTGTATTGAAAAGATATGGAAGGGATGCCTACAGAATATTTAGGTTGCTGTCAAAGGCTAATCGGCTTATTGAGACTGATGAGATTGCAGAATCCAGTTTAGTAGAGAAAAAGGATACTCTCAAGTCCCTTTACATGTTGTGGAAGGATGAGTACTTGCATATGGAGAAATTAGTTTTAGTTGGAACCAGACAAACGCAATGGCTATTATGGAAAGTTAACAAGCCTGCCCTTTGGGAACATGTACTGGATGAGATGTACCACGCTGCTTTAAATCTGAGTTTACGATTTGCTCATGAAGAGGCAAAAGCACAGGAGGTTAGTAGATGCGACTCTTCCTTGTTCTGTCGTAACATCAGGATTTCACGTATGGTATGTACGTTATCTTTGTCTTCAAATGTTACTTGTTCCAGGTCATGGATATCCCACTAG 1575 0.4025 MVSQYGIKLAVHLITNHFGNLVSKVCETLLRKGVMTWVELVRFTELTKEQVKNSLLVLIQHNCVQAFVEERDARDGVKTSTMYLAVFDNIIHRLRFPKFLDIVYQELDTEDTKSLPCGKVLSGILKDGRLTLSQIVDRLRHTEGKHVDESLVKERLGKLLAARYVERCPAPDPILHPVAKEEGTTKKRGAKAAKVEHEVPVTLEQRVLAAAVPMDAIRFSLVSIVDSFENTGISPNNSPKTSVGEKRKRDAFDMGKESNAAGDESTPWRANFEEFVLHLRDKACVENVRTRMDDGAATVLNAILDKSRTSEKKVKIDNSVPLSLSTIFEEVMKSEAGRTMTLDRVRASLVQLGCPQRMPNDSFSIDLKGIIELARNEEVESTVLKRYGRDAYRIFRLLSKANRLIETDEIAESSLVEKKDTLKSLYMLWKDEYLHMEKLVLVGTRQTQWLLWKVNKPALWEHVLDEMYHAALNLSLRFAHEEAKAQEVSRCDSSLFCRNIRISRMVCTLSLSSNVTCSRSWISH* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00344 524 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 8 68 IPR013197 -
Pte9g00344 524 Gene3D - 271 353 IPR036388 -
Pte9g00344 524 Gene3D - 87 177 IPR036388 -
Pte9g00344 524 MobiDBLite consensus disorder prediction 230 249 - -
Pte9g00344 524 Gene3D - 2 77 IPR036388 -
Pte9g00344 524 FunFam DNA-directed RNA polymerase III subunit RPC3 2 85 - -
Pte9g00344 524 FunFam DNA-directed RNA polymerase III subunit rpc3 87 176 - -
Pte9g00344 524 Pfam RNA polymerase III subunit RPC82 157 342 IPR008806 GO:0003677|GO:0006351
Pte9g00344 524 Gene3D - 367 455 IPR036388 -
Pte9g00344 524 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 1 488 IPR039748 GO:0003697|GO:0005666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00344 K03023 - qsa:O6P43_008202 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00344 9 4092123 4104587 Pte9g00344 9 4092123 4104587 RCT