Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00277 ATGGCTTTATCTACGAGACTAGACAATGCGCTCTTCTCTGCATTCAAACCTCAAAGTTCAATGATTCCTCCTTCAATACAATCTATTTCATCCTCTTCTCTAATCAAAGGTCCCACCTTCCGCCCTCTTAGAACCTCAAAAACTGTCAGAATCAGAGTCAGAGCTTCTTCTTCGTCTTCTTCTTCATCCTCTTCTCGTACTACCATTGCAGAGCCCCATGGCATTAAGATTAATTTGGTTCCCACAAAACCAATCGAAGGGCAGAAGACGGGAACCAGTGGCCTCCGGAAGAAGGTGAAAGTTTTTATGCAAGAAAATTACCTTGCAAACTGGATACAGGCATTATTTGACTCCCTGCCTCCTGAGGATTACAAGAACGGAGTGTTAGTGTTGGGAGGGGATGGACGATACTTTAATCGAGAGGCCTCACAGATAATTATCAAAATTGCTGCAGGAAATGGTGTTAGCAAAATTTTGGTTGGAAAGGATGGTATATTGTCAACACCAGCTGTATCTGCGGTCATTCGGAAGCAGAAGGCCAATGGTGGGTTTATTATGAGTGCAAGCCACAATCCTGGCGGCCCTGAATATGATTGGGGCATTAAGTTTAATTACAGTAGTGGCCAACCTGCACCAGAGTCCATCACTGACAAGATTTATGGAAACACTCTATCTATTTCTGAAATAAAGATGGCTGACATTCCAGATGTTGACCTATCAAATCTTGGGGTTACAAAGTTTGGAAGCTTTAGTGTTGAAGTGATAGATCCAGTGGCAGACTATTTAGATTTAATGGAGAATGTTTTCGACTTTGAGTTAATAAAGCATCTTCTCTCAAGAGCAGATTTCAGGTTTGTATTTGATGCCATGCATGCAGTCACTGGTGCCTATGCCAAACCCATCTTTGTTGATAGATTGGGTGCTAGTCGGGATTCAATATCCAATGGAACACCTTTGGAGGATTTTGGGCACGGACATCCTGATCCCAATCTTACGTATGCGAAAGATCTAGTAAATGTTATGTATGGAGAGCATGGACCTGATTTTGGAGCTGCCAGTGATGGTGATGGAGATAGAAACATGATTCTAGGCAAAAACTTCTTTGTTACACCTTCAGATTCAGTTGCAATTATTGCTGCTAATGCACAGGATGCAATTCCCTACTTCAATTCTGGAGCCAAGGGTCTTGCTCGATCCATGCCAACAAGTGGCGCTCTTGACCGCGTTGCTGAGAAGTTGAAACTCCCATTCTTTGAGGTTCCCACGGGCTGGAAATTCTTTGGGAATCTGATGGATGCAGGGAAGTTGTCAATATGTGGGGAGGAGAGTTTTGGAACAGGTTCTGATCACATTCGTGAGAAGGATGGCATCTGGGCTGTTTTAGCTTGGCTTTCAATCATTGCTTACCGCAACAAAGATAAGAAACCTGGAGAAAAGTTGATTTCTGTATCTGACGTCGTGAAGGAGCACTGGGCAACTTATGGAAGAAACTTCTTCTCCAGATATGACTATGAGGAATGTGAATCTGAAGGTGCCATTAAAATGTTGACATACTTGAGGGACTTTGCCTCTAAGAGCAAACCTGGTGATGAATTTGGTGGTTATGACCTGCAATTCGCGGATGATTTCACATACACCGATCCTGTAGATGGAAGTGTGGCATCAAAGCAGGGAGTCCGGTTTGTTTTCACGGATGGATCAAGGATCATATATCGTTTATCAGGCACTGGTTCTGCCGGGTCTACTGTCAGAATTTATATTGAGCAGTTTGAACCAGATGTGTCCAAACACGATGTGGATGCCCAGATTGCCCTAAAACCATTGATAGATTTAGCTTTGTCTGTGTCAAAGCTTAAAGACTACACAGGAAGGGAACAGCCAACCGTGATAACATGA 1896 0.4325 MALSTRLDNALFSAFKPQSSMIPPSIQSISSSSLIKGPTFRPLRTSKTVRIRVRASSSSSSSSSSRTTIAEPHGIKINLVPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFDSLPPEDYKNGVLVLGGDGRYFNREASQIIIKIAAGNGVSKILVGKDGILSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKMADIPDVDLSNLGVTKFGSFSVEVIDPVADYLDLMENVFDFELIKHLLSRADFRFVFDAMHAVTGAYAKPIFVDRLGASRDSISNGTPLEDFGHGHPDPNLTYAKDLVNVMYGEHGPDFGAASDGDGDRNMILGKNFFVTPSDSVAIIAANAQDAIPYFNSGAKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLISVSDVVKEHWATYGRNFFSRYDYEECESEGAIKMLTYLRDFASKSKPGDEFGGYDLQFADDFTYTDPVDGSVASKQGVRFVFTDGSRIIYRLSGTGSAGSTVRIYIEQFEPDVSKHDVDAQIALKPLIDLALSVSKLKDYTGREQPTVIT* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00277 631 Gene3D - 497 631 - -
Pte9g00277 631 SUPERFAMILY Phosphoglucomutase, first 3 domains 77 289 IPR016055 GO:0005975|GO:0016868
Pte9g00277 631 Gene3D - 265 367 - -
Pte9g00277 631 CDD PGM1 80 631 - -
Pte9g00277 631 Gene3D - 76 264 - -
Pte9g00277 631 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 88 227 IPR005844 GO:0005975|GO:0016868
Pte9g00277 631 FunFam Phosphoglucomutase, cytoplasmic 1 368 466 - -
Pte9g00277 631 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 371 494 IPR005846 GO:0005975|GO:0016868
Pte9g00277 631 SUPERFAMILY Phosphoglucomutase, first 3 domains 355 501 IPR016055 GO:0005975|GO:0016868
Pte9g00277 631 Gene3D - 368 496 - -
Pte9g00277 631 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 555 606 IPR005843 GO:0016868|GO:0071704
Pte9g00277 631 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 183 192 IPR016066 GO:0000287
Pte9g00277 631 SUPERFAMILY Phosphoglucomutase, C-terminal domain 496 631 IPR036900 GO:0016868|GO:0071704
Pte9g00277 631 PRINTS Phosphoglucomutase/phosphomannomutase family signature 282 301 IPR005841 GO:0005975|GO:0016868
Pte9g00277 631 PRINTS Phosphoglucomutase/phosphomannomutase family signature 182 196 IPR005841 GO:0005975|GO:0016868
Pte9g00277 631 PRINTS Phosphoglucomutase/phosphomannomutase family signature 347 362 IPR005841 GO:0005975|GO:0016868
Pte9g00277 631 PRINTS Phosphoglucomutase/phosphomannomutase family signature 318 331 IPR005841 GO:0005975|GO:0016868
Pte9g00277 631 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 75 631 IPR045244 GO:0004614|GO:0005975
Pte9g00277 631 FunFam Phosphoglucomutase 5 477 631 - -
Pte9g00277 631 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 260 363 IPR005845 GO:0005975
Pte9g00277 631 FunFam Phosphoglucomutase 5 76 264 - -
Pte9g00277 631 FunFam Phosphoglucomutase 5 265 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00277 Pte-Chr9 3107202 3114238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00277 K01835 - qsa:O6P43_008291 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00277 9 3107202 3114238 Pte9g00277 9 3107202 3114238 RCT