Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00264 ATGGCTTCCACCCACACACTCTTTCTATCATTGCCCAAGATTGCTCTTCCATGTCCTTCTTCAAAACCCAACCAATCACCTTGTTCTAGTTCTTCTCTTTTTCTATCTTCGTTATTTGGACAAAAGCTCACCTTTTTCTCCGTTGGACATATTGGGCACCGATATAACAAAATATCTGCGGCTGCCACTACCGCTGTGACGTTCAGCCTCCCCACCTTGAAACACAAGGGTTCTGGCGAGAAAGGTCCAATCTGGTCATCAAGAGCAATAAGATCATTTGTATTGGCGGAATCGGAAGCTAGGTATCTTTGTTACTCAAATACAGGAACAGAGGCACTTCTGTTGGGTATTTTAACGGAAGGAACAAGTTTAGCCGCAAAGATCTTAAGAGCCAAGGGTATGTCGCTTCTCAAAGTTAGGCAAGACGTAGTCGATTTACTGGGGAGATCAAACTATTTTCATGACACTGATCTGTATCCTCCCCTAACTAAGCAAGCTCAGGCGGCCCTTGATTGGGCTATTGATGAGAAATTGAAGTCAGGTAGGGAAGGAGAAATAACAGTGAATCATTTGCTTCTTGGTATTTGGGCGCAAGAGCAATCAAGTGCTCACAAGATTATGGCTGCATATGGTTTTGATGACCAGATAGCCAAAGAGCTAGCTGGAAAGATCGATGAAGAAATTGATCTTACCCACAAGAATGTTAAAAGAAACCTCTTGAGCCTGAAGTGA 732 0.4331 MASTHTLFLSLPKIALPCPSSKPNQSPCSSSSLFLSSLFGQKLTFFSVGHIGHRYNKISAAATTAVTFSLPTLKHKGSGEKGPIWSSRAIRSFVLAESEARYLCYSNTGTEALLLGILTEGTSLAAKILRAKGMSLLKVRQDVVDLLGRSNYFHDTDLYPPLTKQAQAALDWAIDEKLKSGREGEITVNHLLLGIWAQEQSSAHKIMAAYGFDDQIAKELAGKIDEEIDLTHKNVKRNLLSLK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00264 243 SUPERFAMILY Double Clp-N motif 85 215 IPR036628 -
Pte9g00264 243 Coils Coil 232 243 - -
Pte9g00264 243 ProSiteProfiles Clp repeat (R) domain profile. 79 227 IPR004176 -
Pte9g00264 243 Pfam Clp amino terminal domain, pathogenicity island component 185 220 IPR004176 -
Pte9g00264 243 Pfam Clp amino terminal domain, pathogenicity island component 96 148 IPR004176 -
Pte9g00264 243 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 19 231 IPR044217 -
Pte9g00264 243 Gene3D - 85 236 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00264 Pte-Chr9 2975473 2978281 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00264 - - qsa:O6P43_005483 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00264 9 2975473 2978281 Pte9g00264 9 2975473 2978281 RCT