Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00253 ATGCAGAAGAAAGTACCTCTATACTTCTTGGTGTTCCTATCTTTAACCACACCTCTTTATTCATGTGATATTGATGATATAAGCATTCTCAGTACTTGTTTGATTGATTGCCAGATTTACAACTTCACCACTCGTCCTCCATACATAGTTGGCCAATCCAGTTACTTTCAAATCCTTGCTTCTTCACTCAATAACCTTCGTTGTTTAGAGCCAACTACCCCTAAGCCACAAGCCATGATAGTACCGAACAGCTTAGAGCAACTAGTGAACAGCCTGCTGTGCTCTAAAAAGTTAGTACCTAAGTGGGATGTTAGAGTGAGAGGAGGCGGCCACAGTTATGAAGGAACTTCATATGCCGCTAATGGTCGATCTCCTTTTGTGATGATTGACATGATGAATCTGAACAGCATCTCAGTGAACGTGAAAACCAAGACAGCTTGGGTGGAGGCTGGCGCCACCTTGGGAGAGATATACTATGCAATCTCTATGGCGAGCAATAAACTTGGTTTCTCAGCAGGGTCATGTCCAACTGTTGGAGCTGGTGGCCACATTTCTGGAGGTGGTTTTGGATTTTTGTCAAGAAAATATGGAGTTGCTGCTGACAATGTTGTGGATGCAATTCTTATTGATCCCAATGGAAAAGTGTTAAACAGCACAACCATGGGAGAAAATGTGTTTTGGGCCATTAGAGGAGGGGGTGGTGGCAATTGGGGTATTGTCTATGCTTGGAAAATCAAGCTGTTGAAAGTGCCAACAACAGTGACAGCTTTCACAGTGTCTAGAGTAAGCAACGTGGTTGAGCTAGTACACAAATGGCAACTTGTTGCACCAAGACTAACAAAGAAATTTTACTTGTCTTGCTTCATTGGTGCTAATTTATCTCAAGCTCAAACTCCAGGAATATCAGCTGCATTCAATGGCTTATATCTAGGGCCTAAGACCAAAGCTTTAGATATCCTAGATGAAGCTTTTCCTGAGTTACGCATTGTGGAAAAGGAATATGAAGAAATGAGTTGGATAGAGTCGATTATATATTTCTCAGGTCTGCCAAAGGGAACAGTTTCTGACTTGCAAAATCGTTACTTGCAATACAAGACATACTTCAAGAACAAATCAGATTATGTACAGTCTGTTATCAACTTTACAGGTATAGAGGTTGCCCTTGACTATCTTAAGAACGAGCCAAAAGGGTTTATGATTTTAGACCCTTATGGAGGAATCATGGATGATATAAGCAGCATGTCCATTCCTTTTCCTCATAGAGAAGGTAATCTGTTCTCAATTCAATATGTTCTCAATTGGGAGAAAGAAGATGACTACAAGAGGCAAGATTTTATTGGTTGGATGAGAAAGTTGTATGATGCAATGGTTCCTTACGTTGCATCAAATCCAAGGACCGCTGCCGTCAATTATATGGACTTTGACTTGGGGGTAATGGACCATGAAGCAAATATCAATCAAGTCGAGCATGCGAGGTCTTGGGGTGAAAAGTACTTCTCAAGCAACTATGACAGATTGGTTAAAGCAAAGACTATTATCGATCCTGAAAATATTTTCAACAATGAGCAAAGTGTTCCTCCATTAACTCAAAGTTAA 1596 0.4066 MQKKVPLYFLVFLSLTTPLYSCDIDDISILSTCLIDCQIYNFTTRPPYIVGQSSYFQILASSLNNLRCLEPTTPKPQAMIVPNSLEQLVNSLLCSKKLVPKWDVRVRGGGHSYEGTSYAANGRSPFVMIDMMNLNSISVNVKTKTAWVEAGATLGEIYYAISMASNKLGFSAGSCPTVGAGGHISGGGFGFLSRKYGVAADNVVDAILIDPNGKVLNSTTMGENVFWAIRGGGGGNWGIVYAWKIKLLKVPTTVTAFTVSRVSNVVELVHKWQLVAPRLTKKFYLSCFIGANLSQAQTPGISAAFNGLYLGPKTKALDILDEAFPELRIVEKEYEEMSWIESIIYFSGLPKGTVSDLQNRYLQYKTYFKNKSDYVQSVINFTGIEVALDYLKNEPKGFMILDPYGGIMDDISSMSIPFPHREGNLFSIQYVLNWEKEDDYKRQDFIGWMRKLYDAMVPYVASNPRTAAVNYMDFDLGVMDHEANINQVEHARSWGEKYFSSNYDRLVKAKTIIDPENIFNNEQSVPPLTQS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00253 531 ProSiteProfiles PCMH-type FAD-binding domain profile. 72 250 IPR016166 GO:0071949
Pte9g00253 531 Gene3D - 29 134 IPR016167 -
Pte9g00253 531 Gene3D - 138 527 IPR016169 -
Pte9g00253 531 Pfam Berberine and berberine like 469 526 IPR012951 GO:0016491|GO:0050660
Pte9g00253 531 Pfam FAD binding domain 76 217 IPR006094 GO:0050660
Pte9g00253 531 PANTHER OS08G0158400 PROTEIN 48 528 - -
Pte9g00253 531 Gene3D - 253 463 - -
Pte9g00253 531 SUPERFAMILY FAD-binding/transporter-associated domain-like 53 251 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00253 Pte-Chr9 2862330 2864069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00253 33 526 Miscellaneous Gene Families AT1G30760 41.153 3.52e-125 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00253 - - gmx:100790761 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00253 9 2862330 2864069 Pte9g00253 9 2862330 2864069 RCT