Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01265 ATGGGATCGTTTTTGAGTACATCCCGGGGCAGCTCTTCTAGCGGTGATGTCGATAAGGTTTCTAGGAATGATACCTGCAAGAGACAAAAGATATCATCAGAGTTTTATGACCTTGGTGCTAGATTGATTCCTTATCTTCCTGATGAGTTATCGCTTCAAATTATAGCAAGACTGCCTAGACTTTTCTATCTTAATTTGAGATTGGTCTCAAGGAAATGGAAGGCAGCTGTTAAAAGTTACGAATTGTATCAATTGAGAAAAGAGTTGAAAATGACTGAGGAGTGGCTATATCTTTTGACGAAGGCTGACAATAAATACTTCTGGCATGCTTTGGATCCTATTTCCAGAAAATGGCAAAGGCTACCTGCAATGCCTAGTGTGGTTGATGAAGATTCATCTCATAAGATCTTTTCAGGGCTTTGGATGTGGAATATGGTTGCGCCGAGTAGTAAGGTTGTTGATTTTGTAAGAGGTTGGCTTGGTAAAAAGCATTTATTAAATGAAATGCCATTTTGTGGTTGTGCTGTTGGAGCTGTTGATGGATGCCTCTATGTTCTAGGTGGTTTTTATAAGGCTTCTACCTTGAAACATGTCTGGCGATTTGATCCTGTAGAACATACATGGAGTGAGTTGGCTTCCATGTCTACAGGAAGGGCTTACTGTAAGACAGCCATCTTGAATAACAAGCTTTATGTTGTTGGTGGGGTAAGTCAGAATCGAGGTGGACTTGACCCTCTTCAGTCTGCTGAAGTTTTTGATCCCTCCACTGGTGCATGGTCTGATGCACCAAACATGCCATTCTCAAGAGCTCAAGTCTTGCCCACTGCATTCTTGGCTGACATGTTAAAGCCAATAGCCACAGGAATGACCTCATATAAGGGAAAGTTGTATGTTCCTCAAAGTTTGTATTCGTGGCCGTTCTTTTTCGATGTTGGAGGGGAAATATATGATCCTGAGACAAATATGTGGGAGGAAATGCCAAGTGGGATGGGAGAGGGCTGGCCTGCAAAGCAGGCTGGGACAAAATTGAGTGTTGTAGTAGATGATGAACTATATGCTTTTGAACCTTCGAGTTCTCTGGATAGTGGAAAGATCAAGGTATACGATCAGAATGAAGATGCATGGAAAATTGTTATTGGAAGAGTCCCCATATACGATTTTGCAGATTCAGAATCTCCATACCTGCTGGCTGCTTTTCATAGTAAGCTTCATTTTATCACAAAAGATGCCGATTGTAAGATTTCCATTCTGTGTGCTGACCTCCGCGATAAATTTGAACAATTTCCGTCAAGCTCAACTTCTTCTTTACCAAGCTCCTTACATCGAGAATATGGGAATGAATCAGATGCAGTTGTTTGGAAAGTTATTGCTACTAGGGATTTTGGTCCGGTTGAGTTGGTCAGTTGCCAAGTCATTGATATGTAG 1425 0.4147 MGSFLSTSRGSSSSGDVDKVSRNDTCKRQKISSEFYDLGARLIPYLPDELSLQIIARLPRLFYLNLRLVSRKWKAAVKSYELYQLRKELKMTEEWLYLLTKADNKYFWHALDPISRKWQRLPAMPSVVDEDSSHKIFSGLWMWNMVAPSSKVVDFVRGWLGKKHLLNEMPFCGCAVGAVDGCLYVLGGFYKASTLKHVWRFDPVEHTWSELASMSTGRAYCKTAILNNKLYVVGGVSQNRGGLDPLQSAEVFDPSTGAWSDAPNMPFSRAQVLPTAFLADMLKPIATGMTSYKGKLYVPQSLYSWPFFFDVGGEIYDPETNMWEEMPSGMGEGWPAKQAGTKLSVVVDDELYAFEPSSSLDSGKIKVYDQNEDAWKIVIGRVPIYDFADSESPYLLAAFHSKLHFITKDADCKISILCADLRDKFEQFPSSSTSSLPSSLHREYGNESDAVVWKVIATRDFGPVELVSCQVIDM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01265 474 PANTHER OS02G0202900 PROTEIN 19 472 IPR045887 -
Pte8g01265 474 Pfam F-box domain 46 83 IPR001810 GO:0005515
Pte8g01265 474 SUPERFAMILY F-box domain 42 96 IPR036047 GO:0005515
Pte8g01265 474 SUPERFAMILY Kelch motif 100 380 IPR015915 GO:0005515
Pte8g01265 474 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Pte8g01265 474 MobiDBLite consensus disorder prediction 1 19 - -
Pte8g01265 474 CDD F-box_AtAFR-like 42 86 - -
Pte8g01265 474 SMART kelc_smart 229 279 IPR006652 GO:0005515
Pte8g01265 474 SMART kelc_smart 182 228 IPR006652 GO:0005515
Pte8g01265 474 MobiDBLite consensus disorder prediction 1 21 - -
Pte8g01265 474 SMART fbox_2 46 86 IPR001810 GO:0005515
Pte8g01265 474 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Pte8g01265 474 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Pte8g01265 474 Gene3D - 40 95 - -
Pte8g01265 474 Gene3D - 96 384 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01265 Pte-Chr8 36544768 36547500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01265 46 259 Miscellaneous Gene Families AT4G33900 27.103 8.87e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01265 - - qsa:O6P43_019683 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01265 8 36544768 36547500 Pte8g01265 8 36544768 36547500 RCT