Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01235 ATGAACATGAAGAGGGGTGGAGAGGTTGATAATACTAGTAGGTGGTTCAGTAAGACTCCTACTGCACCATATCTGAATCTTCTTCATCAACGTTATCTCCCACAGATCAAAGTTAATGCTCTGCAATCGGAGTGTTCTCCTTCTTCGAGTTCCAGTAATGGATTCAATTTATCTGATTGTGATTCTCCATATTCAGCTGTTTCCTTTCAGCACGTTATTCGTGGTCTGACCACCACAGCTGATCATAACATCGATGAGATTTGCTTGAACTCCGGATCACGAGGGAGTTGTCATTTTCACAATATCATCCACGACGACAACTACGACAACAACTGGATTGATGATGATGTGGGGTTGTCTGAGATTTTGAGCAGAATGCATATGGGGGACGAACATGTGGTTGGCACTAAAACCAATGGCCATTCTATTTCTGAGTACTATCTGGATTCCATCAATCCCTATAATGATATTGGAACGCGTGGGCAGTGCAAAGGTATTCGACCCTTTGCTTGCGGGGTTTCACCAGGAGCAGACAACATGCAGTGGTCGCTGTTTGGTTCAAGAAATGAATCTGTAGTTGGTAACCCAGTGGAGTCTTTGCTGTCTAATGATCAGTCTGATGTTCTGTATTCTGATTCGGGCTGGGAAAGAAATCCATTAATCAATCAAACGTGTCATTTATCAGCGCAAACGACGGCAGAAGGAAATGCAAATTGTGATGCAGGTGTTGATTTACAGGACCTATCTACGATTAGGCCTTATCTAACTGGTGCAAACATCAGGTCACATATTTTTGGCATGGACAGTAACGGAAGCAGGGAGATGAATTCCATGAGATTCTATCAGTCGATGAACCCCAGAGCGACTCTGAATCTGAGTCCATTAGGTGGGTGTTCAAGTGCAAACACTGAAGGTATGGCTAATCAAATCTTTGACTCCAATGTAGTTGCAGGGGATCCTTTGGCCTATAGATGCGATGATGGTTTCGTCATACAAGAAAACAATTTGAAATATGCCATAAATAAGGAATACAGTTCTTTTGGAAGTCGCAACAATAAATCCCAAAGTGAGATTGCAACTGTAATTGGACCAGACAAGACTTTCTGGCAAGATGGCCACACCCCGTCACGACAAAATTGTGAAAGTGAGTGGGGTTTGAATAGTGAAATGGCTTTGCCTATGTCTTTGGCTGAGCTGCAAATGTACATATACTTCCTGTCAAGAGATCAAAATGGCTGTCGTATGTTACAAAGGATGTTGGATGGTGGAACCTGTCAAGACATACAAATAATATTTCAGGGCATTCTACAACATATAATTGAACTTATGATGGACCCTTTTGGGAATTACCTTGTTCAGAAGTTGTTAGATGTATGTAGTGAGCAACAGAGAATGCAGATTCTATTCATGGCAACTAAACAGCCAGGACAACTTGTGAGAATCTCTTTGGACATTCATGGCACTCGTGTGGTGCAGAAGTTAATCGAAATAGTCAAGACCAAGAAGCAAATTTCTTTAATCAAGTCCTCTCTTCAACCCGGTTTCCTTCATCTGGTCAAGGATCTCAATGGAAACCATGTCATACAGCGCTGCTTGCAATGCCTTAGCAGTGAAGATAATGAGTTTATTTTTGAGGCTGCTACAAGGTTTTGTACGGACATGGCAACTCATCAACATGGATGTTGCGTACTACAACGATGCATTGATTATGCCAAAGGAAGATACCTTGAAAAGCTGGTGGCAGAAATCTGCAGGAACGGCCTTCTCCTTGCGCAAGATCCTTTTGGAAACTATGTTGTTCAATATATTTTGGAGATGAAAATTCCTAATGTTGGTTCCAAGTTGAACTCTCAGTTCAAAGGGCACTACGTAAACCTGTCGGTGCAGAAGTTTAGTAGCCATGTTGTTGAAAAATGTCTTAAGCATCTTGAAGAGACCAGATCAAGAATTGTCCAAGAATTGCTTTCTGCGTCTCACTTTGAACATTTGCTACAAGACCCGTATGCCAACTATGTCATTCAATCTGCTCTTGCAGTTACCAAGGGCCATCTTCACGTTTCATTGGTTGAAGCCGTTCGCCCTTACAAAATTCTACGTACCAGTCCTTATTGCAAAAGGATCTTCTCTCGAAATCTTCTCAAGAAGTGA 2148 0.4195 MNMKRGGEVDNTSRWFSKTPTAPYLNLLHQRYLPQIKVNALQSECSPSSSSSNGFNLSDCDSPYSAVSFQHVIRGLTTTADHNIDEICLNSGSRGSCHFHNIIHDDNYDNNWIDDDVGLSEILSRMHMGDEHVVGTKTNGHSISEYYLDSINPYNDIGTRGQCKGIRPFACGVSPGADNMQWSLFGSRNESVVGNPVESLLSNDQSDVLYSDSGWERNPLINQTCHLSAQTTAEGNANCDAGVDLQDLSTIRPYLTGANIRSHIFGMDSNGSREMNSMRFYQSMNPRATLNLSPLGGCSSANTEGMANQIFDSNVVAGDPLAYRCDDGFVIQENNLKYAINKEYSSFGSRNNKSQSEIATVIGPDKTFWQDGHTPSRQNCESEWGLNSEMALPMSLAELQMYIYFLSRDQNGCRMLQRMLDGGTCQDIQIIFQGILQHIIELMMDPFGNYLVQKLLDVCSEQQRMQILFMATKQPGQLVRISLDIHGTRVVQKLIEIVKTKKQISLIKSSLQPGFLHLVKDLNGNHVIQRCLQCLSSEDNEFIFEAATRFCTDMATHQHGCCVLQRCIDYAKGRYLEKLVAEICRNGLLLAQDPFGNYVVQYILEMKIPNVGSKLNSQFKGHYVNLSVQKFSSHVVEKCLKHLEETRSRIVQELLSASHFEHLLQDPYANYVIQSALAVTKGHLHVSLVEAVRPYKILRTSPYCKRIFSRNLLKK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01235 715 SUPERFAMILY ARM repeat 395 709 IPR016024 -
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 618 656 IPR001313 GO:0003723
Pte8g01235 715 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 273 710 - -
Pte8g01235 715 Gene3D - 383 713 IPR011989 -
Pte8g01235 715 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 377 715 IPR033133 GO:0003723
Pte8g01235 715 CDD Pumilio 403 710 IPR033712 GO:0003723
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 434 470 IPR001313 GO:0003723
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 398 433 IPR001313 GO:0003723
Pte8g01235 715 FunFam Pumilio homolog 9 387 715 - -
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 510 545 IPR001313 GO:0003723
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 582 617 IPR001313 GO:0003723
Pte8g01235 715 ProSiteProfiles Pumilio RNA-binding repeat profile. 471 508 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 618 652 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 510 545 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 473 508 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 398 433 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 655 689 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 582 616 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 434 469 IPR001313 GO:0003723
Pte8g01235 715 SMART pum_5 546 581 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 477 504 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 590 605 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 661 677 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 515 545 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 622 655 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 403 435 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 438 468 IPR001313 GO:0003723
Pte8g01235 715 Pfam Pumilio-family RNA binding repeat 551 584 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01235 Pte-Chr8 36293593 36298008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01235 - - qsa:O6P43_019655 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01235 8 36293593 36298008 Pte8g01235 8 36293593 36298008 RCT