Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01228 ATGGCCAGTGGTGGTGGATGTAGCATAGTATGGTTCAGGAGAGATCTGAGGGTAGAGGATAATCCAGCGCTGGCAGCTGGAGTCAGAGCAGGACCTGTTGTCGCTGTTTTCATATGGGCACCTGAAGAAGAAGGCCACTACCAGCCTGGCAGGGTGTCAAGGTGGTGGCTGAAACACAGTTTAGCTCATCTTGATTCGTCTTTGAGAAGCCTTGGCACGTCACTTGTCACCAAGAGGTCATCTGATAGTGTTTCTTCTCTGCTTGAGATCGTGAACTCCACTGGTGCCACTCAGCTCTTCTTTAACCATTTACACGATCCTCTGTCACTCGTCAGAGATCATCGGGCAAAGGAGGTTCTTACTGCTCGTGGCATAGTAGTTCGTTCATTCAATGCAGATTTACTTTATGAACCATGGGATGTGACCGATGCCCATGGTCGACCTTTCACAACCTTTGCTGCTTTCTGGGAGAGGTGCCTTAGCATGCCATATGACCCAGAGGCACCACTTCTCCCTCCTAAGAAAATTATTCAAGGTGATGTATCAAGATGTCCTTCAGATACTTTGGTGTTGGAAGATGAACTAGAGAAGGCAAGCAATGCACTTCTTGCTCGAGCATGGTCACCTGGGTGGAGCAATGCTGACAAGGCTTTGAGTACATTCATTAATTGCCCCCTCATTGAGTATTCTAAAAATCGAAGGAAGGCTGATAGCGCCACAACCTCGTTTCTTTCCCCTCATTTGCATTTTGGAGAGGTGAGTGTAAGAAAAGTCTTTCATCTTGTTCGCATCAAGCAGGTTTTGTGGGCAAATGAAGGAAACAAGGCAGGTGAGGAGAGTGTGCATCTGTTTCTCAAGTCTATCGGTTTAAGAGAATATTCTAGGTACATGAGTTTCAACCATCCCTATAGTCATGAAAGGCCTCTTCTAGGCCACCTGAAGTTCTTCCCCTGGAATGTCAATGAAAGCTATTTTAAGGCATGGAGGCAAGGCAGAACCGGTTATCCATTGGTGGATGCAGGCATGAGGGAGCTCTGGGCCACTGGTTGGTTACATGATCGAATAAGAGTTGTAGTTTCCAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGTATGAAGTATTTTTGGGATACCCTCTTGGATGCAGATCTTGAAAGTGATGCTCTTGGTTGGCAGTACATATCTGGTACACTCCCTGACAGTCGCGAATTCGACCGAATAGATAATCCCCAGTTTGAGGGTTACAAATTTGACCCCAATGGAGAATATGTAAGAAGATGGCTCCCTGAACTTTCCAGGCTTCCGACTGAGTGGATACATCATCCATGGAATGCTCCTGAATCAGTACTCCAAGCTGCAGGAATAGAACTTGGTTCAAACTACCCTCTACCTATTGTAGGCATAGATGCAGCAAAAGCTAGGTTGGGAGAAGCACTAACAGAAATGTGGCAGCTAGAAGCAGCTTCAAGAGCTGCAATTGAAAATGGTACTGAAGAAGGACTAGGAGACTCGTCTGAATCTACTCCTATTGCTTTTCCTCAAGATATTCAAATGGAAGAAAACCATGAACCTACGAGGAACCACTCTATCCATCAAATGAGGCGCTACGAGGATCAGATGGTCCCAAGCATGACATCTTCTTCTCTGATTAGGTCAGATGAGGAAGAAGCCTCGTTGGATAGAAATTCCGCAAACCAAAGTAGAGCAGAAGTTCCCTTCAATGTAAATGTCAATCATCAAGCAACCAGAGATACATTTAACCAAGGAAACGTGCAGAATAGTCCTCAGCTGCAGTTTAACTCAATGATTGAACTGCAAAATGCAGCTGAAGATTCTACTGCAGAATCTTCTAGTACTGGTTGGAGAGAAAGGGATGGAGGCATAGTTCCAGTGTGGTCTCCACAAACTTCTAGCTACTCTGAGCAGTTTGCAGGTGATGAAACTGGCATAGGAACCAGTTCAGGTTTTTTACCGAGGCACCCTCCTCAGTCTCACCAATTGTTCAACTGGAGGCGGCTATCACAGACTGGGTAG 2043 0.4591 MASGGGCSIVWFRRDLRVEDNPALAAGVRAGPVVAVFIWAPEEEGHYQPGRVSRWWLKHSLAHLDSSLRSLGTSLVTKRSSDSVSSLLEIVNSTGATQLFFNHLHDPLSLVRDHRAKEVLTARGIVVRSFNADLLYEPWDVTDAHGRPFTTFAAFWERCLSMPYDPEAPLLPPKKIIQGDVSRCPSDTLVLEDELEKASNALLARAWSPGWSNADKALSTFINCPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVHLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWNVNESYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLGEALTEMWQLEAASRAAIENGTEEGLGDSSESTPIAFPQDIQMEENHEPTRNHSIHQMRRYEDQMVPSMTSSSLIRSDEEEASLDRNSANQSRAEVPFNVNVNHQATRDTFNQGNVQNSPQLQFNSMIELQNAAEDSTAESSSTGWRERDGGIVPVWSPQTSSYSEQFAGDETGIGTSSGFLPRHPPQSHQLFNWRRLSQTG* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01228 680 MobiDBLite consensus disorder prediction 635 680 - -
Pte8g01228 680 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 135 IPR006050 -
Pte8g01228 680 Pfam Blue/Ultraviolet sensing protein C terminal 512 622 IPR020978 -
Pte8g01228 680 MobiDBLite consensus disorder prediction 538 570 - -
Pte8g01228 680 Gene3D - 135 294 - -
Pte8g01228 680 ProSitePatterns DNA photolyases class 1 signature 1. 333 345 IPR018394 -
Pte8g01228 680 MobiDBLite consensus disorder prediction 611 630 - -
Pte8g01228 680 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 193 489 IPR036134 -
Pte8g01228 680 NCBIfam cryptochrome photoreceptor 7 482 IPR014134 GO:0009785|GO:0009882
Pte8g01228 680 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 8 178 IPR036155 -
Pte8g01228 680 ProSitePatterns DNA photolyases class 1 signature 2. 353 372 IPR018394 -
Pte8g01228 680 PANTHER CRYPTOCHROME 7 491 IPR002081 -
Pte8g01228 680 MobiDBLite consensus disorder prediction 635 652 - -
Pte8g01228 680 Pfam DNA photolyase 8 164 IPR006050 -
Pte8g01228 680 Gene3D HUPs 9 207 IPR014729 -
Pte8g01228 680 FunFam Deoxyribodipyrimidine photo-lyase 302 491 - -
Pte8g01228 680 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 302 503 - -
Pte8g01228 680 Pfam FAD binding domain of DNA photolyase 284 481 IPR005101 -
Pte8g01228 680 PRINTS DNA photolyase signature 333 349 IPR002081 -
Pte8g01228 680 PRINTS DNA photolyase signature 392 406 IPR002081 -
Pte8g01228 680 PRINTS DNA photolyase signature 353 371 IPR002081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01228 Pte-Chr8 36261578 36265513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01228 K12118 - qsa:O6P43_019640 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01228 8 36261578 36265513 Pte8g01228 8 36261578 36265513 RCT