Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01188 ATGGCTCAGTCTATGCAAGTGTTAAACCCTACTAAAACCCTAATCCCCAAAATCCAACCGGTAACTGCTACCAGTTCTACTTTTGCCACCATCTCTACGGATAGAACAAAATGGAAATTTAAAAGATTCTCGAAAATATGTACTTCCGCGATGCCAAGTCAGAACCAAAAACAACAACGATCTCAGCAACAGTCTTCTTTGATCGATGCTCTGCTCACTGGTAATAGGAAAGAAGAGGTGCTTGGCGTCATCAGGACATCGGTCAACAATTGCCTGTCTGAAACCAATCTCCATTTAACTGTTCCTGGACTCAAATCCAAAACTAGGGGCAAGGTTAGAGATATTTATGAATTTGAAGATTACCTTGTCCTGGTCACCACTGATAGACTGAGTGCATTTGATAGAATCCTCGCTTCCATTCCTTTCAAAGGCCAGGTTCTCAATGAGACAAGTCTTTGGTGGTTTGACAAAACTAAGCATATAACACCCAATGCTGTTATAGCAGTGCCAGACAAGAATGTTACAATAGCAAAGAAATGTTCTGTTTTCCCAGTGGAATTTGTTGCAAGAGGTTTTGTCACTGGAAGCACTGAGACATCATTATGGACAATCTACAATAAGGGCATCAGAAATTATTGTGGCAATATCCTCCAAGAGGGTTTGGTGAAAAACCAAAAGCTTTCTGAAAATGTTCTTACTCCAACAACTAAGGCTGCAGATCATGATGTTCCTGTAACTCCAGATGAGATAGTTAAAAGTGGACTAATGACACCAGCTGAGTATGAAGAAGCAAGTGGAAAAGCGTTGAAGTTGTTTGAATACGGGCAGCGTGTAGCTTTGGAACATGGCCTGATATTGGTGGACACAAAATATGAATTTGGAAAGGGGCCTGATGGCTCCATTCTGTTGATTGATGAGGTGCACACTCCTGATTCAAGTAGATATTGGATTGCCAATACATACTCAGAAAGATTTCAGAATGGCATCGAACCTGAAAATGTTGATAAGGAGTTCTTGAGGCTTTGGTTCAAGGATCATTGCAACCCTTATGAGGATGAGGTCCTTCCCAATGCACCTGAAGATCTTGTTTGTGAACTCGCTTGGCGATATATTTTCCTGTACGAGACGATCACTCAATCAAAACTTGAAACACATTGGACCAAGGAACCAATTCACGATCGCATTTCACGTAATGTTGCAACTGCATTATCTAATCTGCATCAACTATAA 1230 0.4098 MAQSMQVLNPTKTLIPKIQPVTATSSTFATISTDRTKWKFKRFSKICTSAMPSQNQKQQRSQQQSSLIDALLTGNRKEEVLGVIRTSVNNCLSETNLHLTVPGLKSKTRGKVRDIYEFEDYLVLVTTDRLSAFDRILASIPFKGQVLNETSLWWFDKTKHITPNAVIAVPDKNVTIAKKCSVFPVEFVARGFVTGSTETSLWTIYNKGIRNYCGNILQEGLVKNQKLSENVLTPTTKAADHDVPVTPDEIVKSGLMTPAEYEEASGKALKLFEYGQRVALEHGLILVDTKYEFGKGPDGSILLIDEVHTPDSSRYWIANTYSERFQNGIEPENVDKEFLRLWFKDHCNPYEDEVLPNAPEDLVCELAWRYIFLYETITQSKLETHWTKEPIHDRISRNVATALSNLHQL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01188 409 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 104 379 IPR028923 -
Pte8g01188 409 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 94 186 - -
Pte8g01188 409 ProSitePatterns SAICAR synthetase signature 2. 286 294 IPR018236 GO:0004639|GO:0006164
Pte8g01188 409 ProSitePatterns SAICAR synthetase signature 1. 182 196 IPR018236 GO:0004639|GO:0006164
Pte8g01188 409 CDD SAICAR_synt_Sc 109 378 - -
Pte8g01188 409 Gene3D Phosphorylase Kinase; domain 1 94 183 - -
Pte8g01188 409 Gene3D - 184 327 - -
Pte8g01188 409 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 182 332 - -
Pte8g01188 409 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 33 403 - -
Pte8g01188 409 SUPERFAMILY SAICAR synthase-like 98 381 - -
Pte8g01188 409 Pfam SAICAR synthetase 108 353 IPR028923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01188 Pte-Chr8 35967540 35971462 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01188 K01923 - qsa:O6P43_019592 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01188 8 35967540 35971462 Pte8g01188 8 35967540 35971462 RCT