Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01168 ATGCATGTCACCAGGAATCTAGGGTTTTCAAGCCTGGTCCCTGTGCTGTGTTTGGTTGTACCAGTGATTTGGTTTGTAATTCGGAGAAAATGGCGTCTTGCTGCGGCAAGGAGAGAGGAGATCAAAAGGCTTCTCATCTTGGCGTCGGAAGAGGCTGCCAGAGCTGAATTCGAAGCCTCTGTTTCCTATACTTCATTTCCAATTGTTGCTAATAAGAATCAATGTGCGGTGTGCTATTGTCCCACCACTACGCGATGCGCTCAATGCAAAGCGGTTCGCTACTGTTCTGGTAAGTGTCAAATCATTCATTGGCGTCAAGGTCACAAGGAGGAATGCCGTCCTGCTAACATCACTTGGAGCGATGATGTGATAGGTGATTCTTACAAGGATGCTGCAAAATTAAACCAACATGCGATTAACAGTAACAAGACTGCTACTGAAGGCGAATGGTGTGGTAAACCAATTCATTTGCCATCTGAGAACTGTCTGTCATCTGATGATGATGAGCATTCTGAAGGTTGTGGGCTTGATGACAACATGGAGTTCAAGCCTCTTGAAGAAAGCAAGGGGTCTGATTTGGTAACTGAAATGTCTACTAACACATTTTCTGGGTTCTCCACTTCCAACAATAGTAGTGAATCATCTGATGATGCTTCTACCAGCGAGACCAATACATCACATCATCTTGAGAAACCAGAAGGACATATATTGATAGATCGTGCGTTTGGAATTCATGACACCAGTTATGATGTGGACATGTTAGGTAGAACCCTGTCAAACTCACCAAAGTTTGCCAACTTGGTTGATTCTGTAAGCAATTTCACTAAATTGAATAACTTAAATGGAACTGGCAGTAAAGGGGTGAGTAAGCATGCACCAAATGGGTCTTCAGATTTGCATGTGGTTACTGCTGCTGATGAACATAACAGTACCAGGAAATCTATATCTGGAGCATCTCCACTTTATTCATATAAAGCTTCACCAGTCTCCCATGCACAAGGCCCGGAGGCGAATAGATCTGAGTTGAATGATATTTTTTTAAACTCAGTTGCTAACAGTAAGCCATTCATGGAAACTGCATCAGAAAAAATGTGGTCTTCAAGGTTCATGGACTCCCTCTCTGTAAATGGTGTGCATGAGGGACCCATCCTTGTGAATGATGGAATTGCTAACGGTTCTCATAAATTAGAGAACGAAGAAGACAAGTCTGTTCCATTTAAATCAACTCATATCCATCTATCTTTTAAGAAAGATGAAGATTCAAGCTGTACAATTAGTTCAGGTGGCAATGTCTTGCAGCTCAGAAGCTCTAAATGTTCAAATTATGTTGAGAATGATCAAAGCTGTGTTTCTTATCCACCAAAATATTCTGAAGCGTGGTATTCATCTCATGATGGAGGCTATTTATGTGGCACAGAAAGGCATCTGATTCACAATGAGAGGTGTGGAGAAAATGGCACTCAGCCTGCTGTTTCTACGACCCAGGTCCCTAAATCAAGTTGTGAGAATGGTTTGAAAACTTCAGTGTCAAAAGTTGCTGATCAGCTCAAAGGATCAAAGTCATCAAAGTATCATCCATCAATGGTTGGGAGTGAAACTCCTGGGAGATACAAGGACAAGGGGCTTTTTCCATATGACTTGTTTGTAAAGCTTCATATTTGGAACAAGGTGCAACTGCAACCATGTGGTCTTATAAATTGTGGGAATAGCTGCTATGCAAATGTCGTGCTCCAATGCTTGGCTTTTACACCTCCCCTGACTGCTTATTTTCTTCAAAGAATGCATTCTAAATCATGCATAAAGCGAGAGTGCTGTTTTACATGTGAGCTTGAAAGTTTGATTTTGAAGGCAAAGGAAGGAAAATCTCCACTTTCTCCCATGGGCATACTTTCACTATTACAGAACGCTGGATGTCAACTTGGTAATGGAAGAGAAGAAGATGCCCATGAATTTCTTAGGCATGCTATTGACAGTATGCAATCTATTTGTCTAATCGAAGCTGGGATTAAAGCATCAAATTCTCCAGAAGAAGATACCACTTTAGTGGGTTTGACATTTGGAGGATACCTTCGATCAAAGATAAAATGTTTGAAATGTGGGGGGAAGACTGAACGCCAAGAAAGAATGATGGATCTTACAGTTGAAATCGAAGGGGATATAGTAACCCTAGAAGAAGCACTCCAAAGATTTACAAGTACTGAGACCTTGGATGGAGAAAACAAATACCATTGTGTCAGATGTAAATCTTATGAGAAGGCTAAGAAGAAGTTGACAGTTCTGGAGGCACCTAATGTCCTTACGATTGCATTAAAACGATTTCAGGTATTGCTAATGTTGAAATATGTGTCGGTGGCTTGTCTGTGTTTTGATTGTAAATCTCTCAATGTTTCTATGTTTCAGTCTGGAAAATTTGGGAAGCTCAATAAGCCTATTCACTTTCCAGAAATTCTTGACTTGGCTCCATTTATGAGTGGCACTAGTGACAAATCTCCCATATACAGACTGTATGCAGTAGTTGTTCATTTGGATATCATGAATGCAGCATTTTCTGGTCACTATGTGTGCTATGCAAAGAATATGAAGAATAAGTGGTTCAAGATGGATGACAGTGTGGTGACATCCGTTGAACTGGAGAGTGTGCTAACTAAAGGGGCTTACATGCTTTTCTATGCAAGATGCTCACCTCGGGCCCCTAGATTGATAAGGAACAGAATTATGTCCTCAGAACCAAAGATTAACTACATTCCTCCATGGATAAGTGGAAAGAATACCACAATCCAATCAAGATCTGCTGCCACAAATAGTATAACTCGATCTTTCACTAGCCCAGTTTCTACCGACAGTTCAGCCACTTTAGAATCATTCTATTCAAAGTTTCAGCATGTGAGAAGGATCCTGGAGGAAGACTCATCGAGTGATAATTTGTCTCTCATGAGCAACAACTCAGACGAAGGGTCTTGTAGTACTGATAGCACTCGTGATTCTAGCAGCACAGAGGACTTCTCTGATTACTTATTTGGCGATCTTGGACAGGGTTGGAATAAGAATCCAGATTCGGATGCTTCTTCATCTTCATCACCTATGTGCTCCACATCATCATCTCCTTTATATTCTAGACGTTCCCCCCTAGCAAATTTAAACCGTTATGCTTCAAAATCTACTAAAGAAATTGATTTTCAGTCACGGAGTCTTTTTGGTGCGGAGGTTGATGGTAACGCCGGTCTTTGTGATTGCCTTCCTGCAGAGAGCAGGAAACTTGTCTATTCAAGAGGTGAGAACGGTGTTTCTCTTGTGCATTCTGATGCGAATAAACAGTACAGTAGTGTAGCTAGTAGTAGAAGTAGCAATGGTAATAATAGTTTTAGGGAGACTGACCGAGAAAGATTAGTATTTAGCTCTTCCAATGATCTAAAATGTGGTGTATTTTTCAGAACTTCGACGAGAACGAACTGA 3453 0.4101 MHVTRNLGFSSLVPVLCLVVPVIWFVIRRKWRLAAARREEIKRLLILASEEAARAEFEASVSYTSFPIVANKNQCAVCYCPTTTRCAQCKAVRYCSGKCQIIHWRQGHKEECRPANITWSDDVIGDSYKDAAKLNQHAINSNKTATEGEWCGKPIHLPSENCLSSDDDEHSEGCGLDDNMEFKPLEESKGSDLVTEMSTNTFSGFSTSNNSSESSDDASTSETNTSHHLEKPEGHILIDRAFGIHDTSYDVDMLGRTLSNSPKFANLVDSVSNFTKLNNLNGTGSKGVSKHAPNGSSDLHVVTAADEHNSTRKSISGASPLYSYKASPVSHAQGPEANRSELNDIFLNSVANSKPFMETASEKMWSSRFMDSLSVNGVHEGPILVNDGIANGSHKLENEEDKSVPFKSTHIHLSFKKDEDSSCTISSGGNVLQLRSSKCSNYVENDQSCVSYPPKYSEAWYSSHDGGYLCGTERHLIHNERCGENGTQPAVSTTQVPKSSCENGLKTSVSKVADQLKGSKSSKYHPSMVGSETPGRYKDKGLFPYDLFVKLHIWNKVQLQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQRMHSKSCIKRECCFTCELESLILKAKEGKSPLSPMGILSLLQNAGCQLGNGREEDAHEFLRHAIDSMQSICLIEAGIKASNSPEEDTTLVGLTFGGYLRSKIKCLKCGGKTERQERMMDLTVEIEGDIVTLEEALQRFTSTETLDGENKYHCVRCKSYEKAKKKLTVLEAPNVLTIALKRFQVLLMLKYVSVACLCFDCKSLNVSMFQSGKFGKLNKPIHFPEILDLAPFMSGTSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYAKNMKNKWFKMDDSVVTSVELESVLTKGAYMLFYARCSPRAPRLIRNRIMSSEPKINYIPPWISGKNTTIQSRSAATNSITRSFTSPVSTDSSATLESFYSKFQHVRRILEEDSSSDNLSLMSNNSDEGSCSTDSTRDSSSTEDFSDYLFGDLGQGWNKNPDSDASSSSSPMCSTSSSPLYSRRSPLANLNRYASKSTKEIDFQSRSLFGAEVDGNAGLCDCLPAESRKLVYSRGENGVSLVHSDANKQYSSVASSRSSNGNNSFRETDRERLVFSSSNDLKCGVFFRTSTRTN* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01168 1150 MobiDBLite consensus disorder prediction 162 181 - -
Pte8g01168 1150 FunFam Ubiquitin carboxyl-terminal hydrolase 15 67 116 - -
Pte8g01168 1150 SUPERFAMILY Cysteine proteinases 558 896 IPR038765 -
Pte8g01168 1150 MobiDBLite consensus disorder prediction 971 998 - -
Pte8g01168 1150 MobiDBLite consensus disorder prediction 1015 1037 - -
Pte8g01168 1150 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 563 578 IPR018200 GO:0004843|GO:0006511
Pte8g01168 1150 SUPERFAMILY HIT/MYND zinc finger-like 71 114 - -
Pte8g01168 1150 Pfam Ubiquitin carboxyl-terminal hydrolase 562 890 IPR001394 GO:0004843|GO:0016579
Pte8g01168 1150 Gene3D - 67 116 - -
Pte8g01168 1150 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 267 896 - -
Pte8g01168 1150 MobiDBLite consensus disorder prediction 199 232 - -
Pte8g01168 1150 MobiDBLite consensus disorder prediction 199 222 - -
Pte8g01168 1150 FunFam Ubiquitin specific peptidase 36 556 671 - -
Pte8g01168 1150 ProSiteProfiles Zinc finger MYND-type profile. 75 112 IPR002893 -
Pte8g01168 1150 Pfam MYND finger 75 112 IPR002893 -
Pte8g01168 1150 Gene3D Cysteine proteinases 554 902 - -
Pte8g01168 1150 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 562 893 IPR028889 -
Pte8g01168 1150 MobiDBLite consensus disorder prediction 970 998 - -
Pte8g01168 1150 ProSitePatterns Zinc finger MYND-type signature. 75 112 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01168 Pte-Chr8 35768788 35774362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01168 478 897 Miscellaneous Gene Families AT4G31670 44.656 3.66e-116 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01168 K11855 - qsa:O6P43_019570 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01168 8 35768788 35774362 Pte8g01168 8 35768788 35774362 RCT