Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01016 ATGACTGCTGTTGCCACTGCTGCAGCTCTCTCCTTGCCCATCTCTTACACTAGATCATCTAAGCTCAACGCTAAGAAGTTTCACGGTGTAAAGGGAGGATTTAGGGTGCTTGCTGTTTTCGGGGAAGAGGTAGATAAGAAGAGTTGGGGTACGCTTTTTGATGTGGAGGATCCCAGGTCTAAAATTCCACAATGTAAAGGCAAGTTTTTGGATGTACATCAAGCGCTAGAAGTGGCTAGATATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTCGCTATCATGCTCCTTCACGAAAAGGTTGTCGAAGTTTTAAATCCTTTAGCCCGTGAATATAAGTCAATTGGCACAGTGAAGAAGGAACTTGCTGAGTTACAACAAGAACTAGCACAAGCGCACAGAGAGGTTCATATATCTGAAGCAAGGGTTGCCACTGCTTTAGATAAACTAGCTTACATGGAAGCGTTGGTGAATGATAGGCTTTTGCGAGATAAAAATACAGCTGATGCAGAACAGACATCCGTTTCAACCAGTAGCACTGAGCTACTGGATACAGGAAAGAAAAGGGTACCGAGGAAAAGCTTGAATGTATCAGGTCCAGTGCAGTCATATCATCCCCAATTGAGAAATTTCTGGTACCCCATTGCTTTCTCCGCCGACCTAAAGGAAGATACAATGATTCCGATAGAATGTTTCGAGGAACCATGGGTTATATTCAGAGGAAAAGATGAAAAACCTGGGTGTGTTCAAAACACATGTGCGCATAGAGCATGTCCTCTCCATCTTGGTTCCGTGAAAGAGGGCCGTATTCAGTGCCCCTATCATGGATGGGAGTATGCAACTGATGGGAAGTGTGAGAAAATGCCATCTACTCGTCTGCTAAATGTGAAACTAAAGTCATTGCCATGTTTTGAGCATGAAGGAATGATATGGATTTGGCCGGGTAATGGTGCTCCAGAGGCCAAGATTCCTTCTTTACAACCTCCACCTGGATTTCAAATTCATGCTGAGATTGTTATGGAACTTCCTATAGAACATGGGTTACTTCTTGATAACCTTTTGGATCTTGCTCATGCCCCTTTTACTCACACATCAACTTTTGCAAAAGGATGGAGTGTTCCAAGCTTGGTGAAGTTTTTAACACCTGTATCTGGGTTGCAAGGATATTGGGACCCTTATCCAATAGATATGGAATTTCGACCACCATGTATGGTTCTTTCTACGATTGGAATTTCAAAACCTGGAAAATTGGAAGGACAAAGCACAAAACAATGCGCGACTCACTTACACCAACTTCATGTGTGTTTACCATCATCCGGACAGAAGACAAGATTACTCTATAGAATGTCACTGGATTTTGCTCCTGTACTAAAGTACATCCCTTTTGTGCAATACCTATGGAGACATTTTGCAGAGCAGGTCTTGAATGAAGATCTAAGGTTAGTAGAGGGACAACAAGAGCGAATGTTAAGTGGTGTTAATGTCTGGAATTTACCTGTATCCTATGACAAGCTAGGCGTAAGGTACAGACTTTGGAGAGATGCATTAGAGCGAGGGGCAAAGCAACTACCTTTCAGCGAACAGACAAACTCGGATTGA 1608 0.4303 MTAVATAAALSLPISYTRSSKLNAKKFHGVKGGFRVLAVFGEEVDKKSWGTLFDVEDPRSKIPQCKGKFLDVHQALEVARYDIQYLDWRARQDVLAIMLLHEKVVEVLNPLAREYKSIGTVKKELAELQQELAQAHREVHISEARVATALDKLAYMEALVNDRLLRDKNTADAEQTSVSTSSTELLDTGKKRVPRKSLNVSGPVQSYHPQLRNFWYPIAFSADLKEDTMIPIECFEEPWVIFRGKDEKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYATDGKCEKMPSTRLLNVKLKSLPCFEHEGMIWIWPGNGAPEAKIPSLQPPPGFQIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPVSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLHQLHVCLPSSGQKTRLLYRMSLDFAPVLKYIPFVQYLWRHFAEQVLNEDLRLVEGQQERMLSGVNVWNLPVSYDKLGVRYRLWRDALERGAKQLPFSEQTNSD* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01016 535 MobiDBLite consensus disorder prediction 170 189 - -
Pte8g01016 535 CDD Rieske_RO_Alpha_Cao 198 324 - -
Pte8g01016 535 Coils Coil 111 145 - -
Pte8g01016 535 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 256 278 IPR015881 GO:0005506|GO:0051537
Pte8g01016 535 Gene3D - 333 526 - -
Pte8g01016 535 Gene3D - 209 331 IPR036922 GO:0051537
Pte8g01016 535 SUPERFAMILY ISP domain 210 319 IPR036922 GO:0051537
Pte8g01016 535 Pfam Rieske [2Fe-2S] domain 215 296 IPR017941 GO:0051537
Pte8g01016 535 SUPERFAMILY Bet v1-like 311 522 - -
Pte8g01016 535 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 103 522 - -
Pte8g01016 535 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 215 315 IPR017941 GO:0051537
Pte8g01016 535 Pfam Pheophorbide a oxygenase 402 495 IPR013626 GO:0010277
Pte8g01016 535 MobiDBLite consensus disorder prediction 171 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01016 Pte-Chr8 34339026 34343370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01016 K13600 - qsu:111993681 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01016 8 34339026 34343370 Pte8g01016 8 34339026 34343370 RCT