Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00641 ATGGCGGTGCAGTTCCTTCTACTGCTACTGTTTGCATCTTCTGCTGTTTCAGCTGATGAAGATGCATTTATTGGTGTGAACATTGGAACTGATGTTTCAGTTATGCCACACCCAACTCAAGTGGTAGCTCTTCTTAAAGCACAGCAAATTCGATATGTCCGGTTGTATAATGCTGACACAGCTATGCTGGTTGCGCTTGCTAATTCCGGGATTCAAGTAGCTATCTCTGTCCCCAACGAAGAACTCCTAGCAATTGGTCAATCAAATTCGACAGCAGCTAACTGGGTTTCCCACAATGTTGTAGCACATTATCCAGCTACAAACATCACTACCATTGCTGTTGGTTCTGAGGTCCTAATCACTGTCCCTAATGCTGCAAAAGTGCTTGTCAATGCGCTAAGATACATACATTCAGCTCTTGTGGCATCAAATCTCGACCGTCAAATAAAAGTTTCGACACCCCTTTCATCCTCAATTATTCTTGATTCATTTCCACCTTCACAGGCCTTCTTCAATCGTTCCTGGAATCCGGTCTTGATCCCAATGCTTAATTTTCTACAGTCTACTGACTCATTCCTCATGCTTAATATATACCCTTACGATGATTACATGCATTCAAATGGTGTAATTCCACTAGATTATGCACTTTTCAGGCCTCTAGCGCCGACCAAGGAAGCTGTGGATTCTAACACACTTCTCCATTACACCAATGTCTTTGATGCAATGGTTGATGCAGCATATTTTGCCATGGCTTTTCTCAACTTCACGAATGTTCCAGTGGTTGTAACAGAGTCGGGCTGGCCATCCAAAGGTGACTCCAATGAACCTGATGCAACATTGGAGAACGCTAACACTTACAACAGCAATTTGATAAGGCACGTGCTGAACAAAACCGGAACCCCGAAACACCCTGGAATCGCTGTCAGCACTTACATCTATGAGCTCTATAATGAGGATGCTAAGATGGGGCCGATTTCGGAGAAGAACTGGGGGTTGTTTAATGCAGATGGAGATCCTGTCTACATTTTACACCTGACAGGATCAGGAGCAGTATTGGCAAATGACACTACCAATCAAACTTTCTGTACTGCAAGAGATGATGCTGATCCGAAGATGCTGCAGGCTGCGCTTGATTGGGCATGTGGACCTGGCAAAGTGGATTGCTCAGCCATGTTGCAGGGACAACCCTGCTATGAACCAGACAATGTAATTGCTCATGCAACATATGCTTTTGATGCATACTATCATAAGATGGGGAAGGTTCCTGATGCTTGTGACTTCAATGGAGTTGCTTCTATCACCACATCAGATCCAAGTCATGGTTCGTGTATGTTTCCAGGAAGCCTTGGCAAGAATGGAACGTTGGCTAACTTTACAGCCCCTTCCATGAACTCCTCCACAGTTGCAGATTCTTCAGCGTGCAATCTTCATGGCAATGTTTTTACGATCCTTGCAGCTTTGATTGGTTATCTAATATTGGGTGCAGCTTTGCTATAG 1497 0.4422 MAVQFLLLLLFASSAVSADEDAFIGVNIGTDVSVMPHPTQVVALLKAQQIRYVRLYNADTAMLVALANSGIQVAISVPNEELLAIGQSNSTAANWVSHNVVAHYPATNITTIAVGSEVLITVPNAAKVLVNALRYIHSALVASNLDRQIKVSTPLSSSIILDSFPPSQAFFNRSWNPVLIPMLNFLQSTDSFLMLNIYPYDDYMHSNGVIPLDYALFRPLAPTKEAVDSNTLLHYTNVFDAMVDAAYFAMAFLNFTNVPVVVTESGWPSKGDSNEPDATLENANTYNSNLIRHVLNKTGTPKHPGIAVSTYIYELYNEDAKMGPISEKNWGLFNADGDPVYILHLTGSGAVLANDTTNQTFCTARDDADPKMLQAALDWACGPGKVDCSAMLQGQPCYEPDNVIAHATYAFDAYYHKMGKVPDACDFNGVASITTSDPSHGSCMFPGSLGKNGTLANFTAPSMNSSTVADSSACNLHGNVFTILAALIGYLILGAALL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00641 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 434 IPR044965 GO:0004553|GO:0005975
Pte8g00641 498 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
Pte8g00641 498 Pfam X8 domain 361 431 IPR012946 -
Pte8g00641 498 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Pte8g00641 498 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Pte8g00641 498 Gene3D Glycosidases 23 349 - -
Pte8g00641 498 SMART X8_cls 360 445 IPR012946 -
Pte8g00641 498 Gene3D - 354 447 - -
Pte8g00641 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Pte8g00641 498 FunFam Glucan endo-1,3-beta-glucosidase 3 23 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00641 Pte-Chr8 29117982 29120850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00641 18 467 Glycoside Hydrolase AT1G66250 74.779 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00641 K19891 - cit:102623352 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00641 8 29117982 29120850 Pte8g00641 8 29117982 29120850 RCT