Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00610 ATGGAAAAACCAGTGCTTTCAAAATATTTATCCTTATCCTCATCAAGATTTAGATCATGTGGTGTACGAGTGCTCTCACAGTCTTTCTCTACCCATAATGATAGTTCTCGGCCACAGATAAGAGAGTGGGCACTGCAAGATTTCTATACCCTGCGACGAGATGTGGAAAGCAGTTCAAGGCGTGTTCACGAGATATTACAGTCTGTGGGTCTGGAAGATTTGTATAACGAGCTTGCAAATCTGGAGTCTAAAGCCGCTGAGCCCTCCTTCTGGGATGACAGACCCAAAGCTCAAGATACCCTTTTGAACCTCTCTGATGTCAAAGACAAAATCAATTTGCTTACTCACATGAAAGCCCAGGTGGACGATGCCCTTACTATTGTTAAGCTCACGGAGGAGATGATATCGGTTGACTCTATCTCTATTGACCCCGGACTGCTAGACGAGGCTGCGTCGCTCGTCCACTACTTGAACAAAGCCTTGGATCGCATGGAGGTCACTCAGCTTCTATCTGCTCCTTATGACAAGTATGGTGCTATTATCTCAATTACTGCTGGAGCAGGAGGTACAGACGCACAGGATTGGGCTGACATACTCCTTAGAATGTACGTGAGGTGGGCTGAGAAGCAAAATTACAAGGCCACATTGGTCGAAAAATCCCCTGGAGAGGAAGCTGGGATTAAATCTGCTACAATTGAAGTTGAAGGTGGTTATGCTTATGGCTATTTATGTGGTGAAAAGGGAACACACCGCGTAGTTCGACAATCTCCTTTTAATGCCAAAGGCCTCCGCCAGACCAGCTTCACTGGTGTTGAAATTATGCCTCTCCTTCCCGAAGAATCGTTGGATGTCGAAATCCCAGATGTGGATCTCGAGATTAGTTTCTCAAGGGCAGGAGGGAAAGGAGGACAAAATGTTAACAAGGTTGAAACTGCGGTGCGGATCACACACATCCCAACTGGCATTACTGTACGCTGCACAGAAGAGAGATCCCAACTGGCAAACAAAATCAAGGCCCTGAGCCGGTTGAAGGCCAAGTTGCTAGTCGTAGCTGAAGAACAACGAGCGTCCGAAATTAAGCAGATACGTGGAGATGCAGTAAAAGCTGAATGGGGACAACAGATACGAAACTACGTATTTCATCCGTACAAACTTGTAAAAGATCTCAGAACGGGATACGAGACATCGGATATAACTTCCGTGATGGATGGCGAATTGGAGCCTTTCATCAAATCTTATCTGAAATACAAGTACAGTATGGGAGTCTCAGGAAGTGGGAGCTGA 1284 0.4595 MEKPVLSKYLSLSSSRFRSCGVRVLSQSFSTHNDSSRPQIREWALQDFYTLRRDVESSSRRVHEILQSVGLEDLYNELANLESKAAEPSFWDDRPKAQDTLLNLSDVKDKINLLTHMKAQVDDALTIVKLTEEMISVDSISIDPGLLDEAASLVHYLNKALDRMEVTQLLSAPYDKYGAIISITAGAGGTDAQDWADILLRMYVRWAEKQNYKATLVEKSPGEEAGIKSATIEVEGGYAYGYLCGEKGTHRVVRQSPFNAKGLRQTSFTGVEIMPLLPEESLDVEIPDVDLEISFSRAGGKGGQNVNKVETAVRITHIPTGITVRCTEERSQLANKIKALSRLKAKLLVVAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDLRTGYETSDITSVMDGELEPFIKSYLKYKYSMGVSGSGS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00610 427 NCBIfam peptide chain release factor 2 57 415 IPR004374 GO:0005737|GO:0006415|GO:0016149
Pte8g00610 427 SUPERFAMILY Release factor 74 417 IPR045853 -
Pte8g00610 427 Gene3D - 181 411 - -
Pte8g00610 427 SMART PCRF_a_2 133 246 IPR005139 GO:0006415
Pte8g00610 427 Hamap Peptide chain release factor 2 [prfB]. 47 418 IPR004374 GO:0005737|GO:0006415|GO:0016149
Pte8g00610 427 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 46 418 - -
Pte8g00610 427 Gene3D Release factor 53 174 - -
Pte8g00610 427 Pfam RF-1 domain 281 390 IPR000352 GO:0003747|GO:0006415
Pte8g00610 427 Pfam PCRF domain 76 271 IPR005139 GO:0006415
Pte8g00610 427 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 297 313 IPR000352 GO:0003747|GO:0006415
Pte8g00610 427 Gene3D - 277 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00610 Pte-Chr8 28658645 28662143 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00610 K02836 - cit:102615234 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00610 8 28658645 28662143 Pte8g00610 8 28658645 28662143 RCT