LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g00603	ATGACCACAGCTGCTCCAATGGCAAGTCAGATCAAGTCGAGTTTCACCTCACCTACCACAAGACATTTTCGGATTATACCAAGAGGCCTCTCTGGCTCTGTGCTCCATGTCCTGCCAACTTCTGGAAGACCGTCTAGCTTTACTGTCAAGGCTATCCAATCAGAAAAGCCAACTTACCAAGTTATCCAGCCTTTGAATGGTGACCCATTCATCGGAAGCCTGGAAACTCCTGTTACATCCAGCCCATTCATTGCATGGTACCTTTCTAACCTTCCAGCCTATCGGACTGCTGTCAACCCACTTCTAAGGGGTATTGAAGTGGGTCTGGCCCATGGGTTTCTATTGGTTGGCCCATTCGTGAAGGCTGGCCCATTGAGAAACACACCCTACGCGGGAGGAGCCGGGTCTCTTGCTGCGGCTGGACTTGTGGTCATACTGAGCATTTGCTTAACAATGTACGGAATCGCATCCTTCAACGAGGGTGAGCCATCAACGGCTCCGTCTTTAACATTGACGGGCCGAAAGAAGGAGCCGGATCAATTGCAAACTGCTGATGGTTGGGCCAAGTTCACGGGTGGTTTCTTTTTTGGAGGCATTTCAGGTGTTACATGGGCCTACTTCCTCCTCTACGTGGTAAACCTTCCTTACTATTTCAAGTGA	660	0.4985	MTTAAPMASQIKSSFTSPTTRHFRIIPRGLSGSVLHVLPTSGRPSSFTVKAIQSEKPTYQVIQPLNGDPFIGSLETPVTSSPFIAWYLSNLPAYRTAVNPLLRGIEVGLAHGFLLVGPFVKAGPLRNTPYAGGAGSLAAAGLVVILSICLTMYGIASFNEGEPSTAPSLTLTGRKKEPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVVNLPYYFK*	220

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g00603	219	Gene3D	Photosystem I PsaL, reaction centre subunit XI	56	219	IPR036592	GO:0009522\|GO:0009538\|GO:0015979
	Pte8g00603	219	FunFam	Photosystem I reaction center subunit XI	56	219	-	-
	Pte8g00603	219	PANTHER	PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC	2	219	IPR022980	-
	Pte8g00603	219	SUPERFAMILY	Photosystem I reaction center subunit XI, PsaL	62	218	IPR036592	GO:0009522\|GO:0009538\|GO:0015979
	Pte8g00603	219	Pfam	Photosystem I reaction centre subunit XI	61	212	IPR003757	GO:0009522\|GO:0009538\|GO:0015979

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g00603	Pte-Chr8	28568097	28570313	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g00603	K02699		-	qsu:112012566	359.377

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte8g00603	8	28568097	28570313	Pte8g00603	8	28568097	28570313	RCT