Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00596 ATGACTCGCATCTTCTGGAAGTCAATCAAGGATAAGTTAATCTTCCCCTTTGTCGAGCTGGATATCAAATACTTTGATCTGGGCCTTCCACACCGTGATGCCACTGATGATAAAGTTACTGTTGAAAGTGCAGAAGCTACTCTGAAGTATATGAAGATAAAATTTATGGCCTTGTCAATGACAGATGAAGCCCGTGTAAAGGAATTTGGCTTAAAGCAGATGTGGAGAAGTCCAAATGGGACCATTAGGAATATATTGAACGGAACTGTCTTTAGAGAACCAATCATCTGCAAAAATGTTTCTCGTCTTGTTCCCGGTATGTTTGTAGTTTTTCTTTGGATATTAGGAATGATGCCACGCTATATGCTGACAAGTTTGGTACTTATAGGTTGGACAAAACCAATTTGCATTGGAAGACATGCTTTTGGTGATCAGTACCGAGCCACTGACACTGTCATTAATGGACCAGGAAAACTGAAACTAGTGTTTGGAAAAGATGGGAAGAGCGAGTTGGAGGTTTTTGACTTCACGGGTGCTGGAGGTGTTTCATTAGCCATGTACAACACGGATGAGTCAATTCGTGCTTTTGCTGAGGCTTCCATGAATACTGCATATGAGAAAAAATGGCCACTATACCTTAGCACTAAGAACACCATCCTCAAGAAGTATGATGGAAGATTCAAGGATATTTTTCAAGAAGTTTACGAGGCCAACTGGAAATCAAAGTTTGAGGCTGCTGGTATATGGTATGAGCACCGTCTCATTGACGATATGGTGGCGTATGCTCTCAAGAGTGAAGGAGGTTATGTATGGGCTTGCAAGAACTATGATGGAGATGTCCAGAGTGATTTCTTAGCCCAAGGATTCGGATCTCTTGGTTTGATGACATCTGTACTGGTGTGCCCTGATGGAAAGACCATTGAAGCAGAAGCAGCCCATGGTACAGTTACGCGGCATTTCAGAGTTCATCAGAAAGGAGGTGAAACCAGCACAAACAGTATAGCATCTATCTTTGCTTGGACAAGAGGACTGGCTCATAGGGCAAAGCTCGATGACAACGCTAGACTATTGGATTTCACCGAAAAGCTAGAAGCTGCATGTATTGGTGCAGTAGAATCTGGGAAGATGACCAAGGATCTTGCAATCATTGTCCATGGATCCAAGGTAACTAGGGACCAATATCTGAATACAGAGGAGTTCATTGATGCTGTGGCTGAGGAGCTAAAAGCAAGGCTAAGTGCTTAA 1245 0.4273 MTRIFWKSIKDKLIFPFVELDIKYFDLGLPHRDATDDKVTVESAEATLKYMKIKFMALSMTDEARVKEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVSRLVPGMFVVFLWILGMMPRYMLTSLVLIGWTKPICIGRHAFGDQYRATDTVINGPGKLKLVFGKDGKSELEVFDFTGAGGVSLAMYNTDESIRAFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFTEKLEAACIGAVESGKMTKDLAIIVHGSKVTRDQYLNTEEFIDAVAEELKARLSA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00596 414 Pfam Isocitrate/isopropylmalate dehydrogenase 131 404 IPR024084 -
Pte8g00596 414 Pfam Isocitrate/isopropylmalate dehydrogenase 1 102 IPR024084 -
Pte8g00596 414 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 275 294 IPR019818 GO:0000287|GO:0016616|GO:0051287
Pte8g00596 414 Gene3D Isopropylmalate Dehydrogenase 1 414 - -
Pte8g00596 414 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 1 413 IPR004790 GO:0004450|GO:0006102
Pte8g00596 414 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 1 412 - -
Pte8g00596 414 PIRSF IDH_NADP 121 414 IPR004790 GO:0004450|GO:0006102
Pte8g00596 414 PIRSF IDH_NADP 1 111 IPR004790 GO:0004450|GO:0006102
Pte8g00596 414 SMART Iso_dh_2 1 404 IPR024084 -
Pte8g00596 414 NCBIfam isocitrate dehydrogenase (NADP(+)) 128 413 IPR004790 GO:0004450|GO:0006102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00596 Pte-Chr8 28479587 28483871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00596 K00031 - pop:7468338 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00596 8 28479587 28483871 Pte8g00596 8 28479587 28483871 RCT