Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00551 ATGAGAAGCCAAATTTTGAAATCTTCAATTAAGCATGCACTCTATCTTTCTATAGGTGTTAGATCAAAAACAACTTCTACTCAGTATGTTGCATCGAGAGCCAGAGACCCAACGTTTGAAAAACTCATGGATAAGTACAAAAACCTTGTCAAAGTCATTGCCATTCAAGATCTTATCCTTGCAAACCCTCAGAACCAGTCAGCGTCTCTTGAGTTTCTCTCTAAGCTATCACAGAAGTTGCATCTTAACCGTGGTGCCCCTGCTTTTCTTCGGAAATACCCTCACATTTTCCACATATTTTATGATCCTGTCAAGTTGCAGCCCTTTTGTAGGTTAACTGATACTGCTCTTGAAATTTCTCATCAAGAAGCTGGAGCTATCAATGCTTCTTTAGCACTTGTTGTGGATAGGTTGGTGAGGATTCTACACATGTCAACAACAAAAACAGTACCGCTTCGCTCAATTTTCAAGGTTTGGAGGGAGCTTGGTCTTCCTGATGATTTTGAAGATTCAGTAATCGCTAAAAATTCTGATATTTTTCAGCTTTGTGATGCTCATGAGCCCAATACTCATTTATTAAAATTGGTGGATGCAAATCCTTGTTGTGATTTTACTGCAGCGGTTGAGAATTGGAGGGTATTGGAAAGCTGTAAGGAGGATAGCAATATTGAGAGAATCGAACTCAGGTTTAGTTTCAAACATGGATACCCTCCAGGAATGAGGTTGACCAAAAACTTTAAGGCAAAGGTCAAAGAATGGCAGAGGTCACCATATGTTGGTCCCTATGAGACAATGAGGGGCTGGAAAACGTCCAAAGCTGGAGTACTGGCTCTGGAGAAAAGGGCTGTGTCTATTGTCCATGAATTCCTCAGTTTAACAGTGGAGAAGATGGTAGAAGTTGAAAAGATCAGTCATTTTAGGAGATGGTTTGGTATTGACTTGAACATAAGAGATCTGTTCCTTGATCACCCTGGGATTTTTTATTTGTCTACCAAGGGGAAACGACATACTGTTTTTCTGAGGGAAGCTTATGAAAGAGGACAGTTGATTGAATCAAATCCTGTTTATGCTGCTAGAAGAAAGCTTCTTGATCTTGTGGCTTTGGGACGCCATGGATTGCTTCACACAGATAATCAAACTATAGTGCAACCCAGAAGTAGAGAAAAAGTGGAACTATCAGAAGAAGTGCAATAA 1194 0.4012 MRSQILKSSIKHALYLSIGVRSKTTSTQYVASRARDPTFEKLMDKYKNLVKVIAIQDLILANPQNQSASLEFLSKLSQKLHLNRGAPAFLRKYPHIFHIFYDPVKLQPFCRLTDTALEISHQEAGAINASLALVVDRLVRILHMSTTKTVPLRSIFKVWRELGLPDDFEDSVIAKNSDIFQLCDAHEPNTHLLKLVDANPCCDFTAAVENWRVLESCKEDSNIERIELRFSFKHGYPPGMRLTKNFKAKVKEWQRSPYVGPYETMRGWKTSKAGVLALEKRAVSIVHEFLSLTVEKMVEVEKISHFRRWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGQLIESNPVYAARRKLLDLVALGRHGLLHTDNQTIVQPRSREKVELSEEVQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00551 397 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 21 375 IPR045040 GO:0003723
Pte8g00551 397 Pfam Plant organelle RNA recognition domain 35 370 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00551 Pte-Chr8 27087990 27090442 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00551 - - qsu:112006257 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00551 8 27087990 27090442 Pte8g00551 8 27087990 27090442 RCT