Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00549 ATGTCTGACCACCAGAAGATCTATCCAATTCTCCAAGATGCTGGGGGAACACAGAACCCTACAGCTCCTTTAGTCCCAAGAAGCATGACTCAATCTGAAAAAGGTTATCCACTCAATGATCAACACCTTCCTCCTCCATTTAGTCGTACCTTTCCATTGCAATACTCCCGACCACCAAAGAGAAGATGCACCTGCTGCAAATGCATATACTGGACTGTAAGCCTGCTATTGCTTCTTACCATTGTTCTTGGCATCACTGTTGGAAGTCTGTACCTTGTGTTCAGACCAAAGCTACCTTCATATTCAGTGGACAGTTTGAAGGTAACCCAGTTCAATCTTTCTGACAGCAACTCTATATATGCCAACTTTGACGTGACAATAACAGCTAGAAATCCAAACAAGAAAGTTGGGATATACTATGTAGCAGGGAGTCACATGAGTGCTTGGTACTCAGACACAAAACTGTGTGAAGGTTCTTTCCCAGTGTTCTACCAAGGTTATCACAACATTACTGTGTTGAATCTGCCATTGTCTGGTCAAACACAGAATGCATCAGGTTTGCTGAGGAGTTTACAGGAACAGTTGCAGCAGGCAGGAAATATCCCACTTTCTCTTAGGGTTAGACAGCCTGTTAGGGTTAGGTTTGGGAAGTTGAAGCTCATAAAAGTGAGGTTCTTGGTGAAGTGCAGATTAGAGGTGAATGGACTTTCTGCTAATCAAGAAATCAGGATTCAAAATAGTAACTGTAAGTTCAGATTCAGGTTTTAG 768 0.4245 MSDHQKIYPILQDAGGTQNPTAPLVPRSMTQSEKGYPLNDQHLPPPFSRTFPLQYSRPPKRRCTCCKCIYWTVSLLLLLTIVLGITVGSLYLVFRPKLPSYSVDSLKVTQFNLSDSNSIYANFDVTITARNPNKKVGIYYVAGSHMSAWYSDTKLCEGSFPVFYQGYHNITVLNLPLSGQTQNASGLLRSLQEQLQQAGNIPLSLRVRQPVRVRFGKLKLIKVRFLVKCRLEVNGLSANQEIRIQNSNCKFRFRF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00549 255 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 29 237 - -
Pte8g00549 255 Pfam Late embryogenesis abundant protein 126 229 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00549 Pte-Chr8 27052816 27053735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00549 43 246 EF-hand Containing Proteins AT5G21130 27.451 8.38e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00549 - - qsa:O6P43_020491 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00549 8 27052816 27053735 Pte8g00549 8 27052816 27053735 RCT