Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00380 ATGAGCAGCGTGGGTTCGAAAGTTATGATTCCGAACAGTTTGAAAATGACGATCCAGAATATTAAGGAGATCACGGGAAATCACAGTGATGAAGACATTTTTACCATGCTAAAAGAATGTTCTATGGATCCTAATGAAACCACTCAGAAGCTTCTTCTTCAAGATACATTTCATGAGGTGAAAAGAAAAAAGGATAGGAAGAAGGAGAGTCTTAACAACAGGGAGTCTTCTGAGTTACATTGGAAAAGTGTCCCTACTGCGAGAGTGGGTAGGGGCAGTCGGGTGATTTTTTCATCCCAGACATCAAAAGATGCTGGTGGTAGTAAAACTTCTTGTCCGGAAAAGGACAATGGAATCAATCAGATTGCAGAGAAGGGTGCTCCGACTCTACCACACTTACAGGAAACAAAGAAAAGAGAAAAGGTTTCTGGAACAAGTTTATCCATTTCTTCTCGGGTAACTGCTAATGGTCATCATGTAGTAGCTGCTGGGCCTATTAGTGTTGTAGATCGATCATCTGTTTTAAGTGCTGGAGCCACGTCAAGTTCCAATAACTCTTCATCCTCAGGTGCTGCTACATCTTCATCTACTGTGTGTTTCTCTTCTTTGGATCCAGTGCTGGAACCCTCTAGTGATTTACGGTTTCCTGGTCCTGTGGGTTCAATTAAATGGGAAGTGGGAGGCCAGCAACCCCCGAGTGAGCCAAGTGCTGATTGGCATCCTGAAAACAAACCTTCTGGAGTACCTGAAATTGGAAACTCTTCTACCCTAGGAAAGAATCCAGGAAAAGCCCAGGAGTCAATGAAGAGTCATCTTACAGATTTATCACAACCTACATCTACTACAACTCATGGAAGCTATTCAACTAGTCGGCCTTCATCTAATTATGGAAGCAGGACACACCAACTAATTGGTCCTCAGAAAGCTGTCTCTAATAAGGAGTGGAAGCCAAAGGCTACAGTAACCAGTTGTCAGGGTACTGTTTCCATAGTGCCATCTCAGGTAACTGCTGTTTCAGGTGAAGCTACTGGTCAGTCTGTACCAAGTGAGGAAGCTTCTTCCAAACTGCAGAAGAAGCTTGAGGACTTGCATCTTCCCCGACATCAGCATGTTATACTTCCTCATCATATTTATGTACCTGAATCTGAGAAGTCCAAGTTCAGTTTTGGAAGTTTGGGTGCAAACTTCGGAGCTACTACAAGCCATGTGACTGGTCCAGGGAGTGATAAGATTGCTGTGAATCTGTCTGAAAATCCACCCAATATTGAAGCAGCTGCTGAGAAGCCAACAACAAGCAGTCCGGACACTGTGCATGTCGCGGTTGAAGAGTTTCCCGAGCATCCTCAGTCTCCTATAAATGTGTCTGAGAATGTGTCATCTGGTGCTGTGGAAGGCTCATCTAGTGTTATTGAGGAGCTTAATGAATCTAAGCAGGATAATACACTGCAACCTCAAAGCCATCAGTACTCAGTGTTACCTAATTCTTCTAACTACAGTTTTGGTTTAATGCCACCAGTCTTGGGGACTCAACTTTCTCAAATTGAAAATTTTGAGTCTCAAGCTTGTGATAGTTCTCGCCTGCACAGCTTTGTTGTTCATCAGTCATTTGATCCAGCTAGTTATTATGCCCAGTTATATAGTTCAGGGCCTGACAGTGATGGTTGTGTTTCACCCTTTGCTGCTTCTGGGGTTAATGCCAAGTACAACGGGAATGTTACAGTTCTGCCCGCACCTAATTCACATTGTCCTCAAGAGGGTGGGATCTTGTCAACAGCAGGTCCAGTACCTCTTGTGAGTCAAGCCGCTGGGCTGATGCAGAGCTCTGTAGCTGTTACTCAGCAGTCGGTCCCTGTGTTTCGGCCCCCAACTGGAGTACATATATCCCATTATCCTGCAAATTACATCCCTTATGGCCATTACATTTCCCCATTCTATGTTCCTCCTCCAGCGATTCACCAATTTTTAGGTAATGGTGCATTTCCTCAACAACCTCAGGTAAGCACCGTATATCCAGCTCTGCCGGCAATTACTGCCACAGGGATAAAATATTCTTTACCTTATAAACCTGGAACAAATGGAGGAAATCCACCTCACATTGTGATGCCTACTGCTTATGGTCCCTATGGCTCCTCATCTGCTGGATATAATCCTAGTTCCACTGCAACTGCTGGAAACTCTAACTCCAATGAAGATCTTGGTGCATCAGTGTTCAAAGAAAATAATTTTTATGGGCAGCAGCAGAGTGAAGGTTCAGCGGTGTGGGTGGCTGCACCTGGACATGAAATTTCGAGTTTGCCAACTAGTTCATTTTATCACCTTCCTCCTCAGGGTCAGCAAATGCCCTTTACCCCTGCACAGGCTGGTCATGGAACTTTTGCTGGTATTTATAACCCTGCACAAGCAGTAACAGCAGCAACTATTCATCCACTTTTGCAACAGTCTCAGACTATGGCCGGTGCTGTTGATATGGTAGGATCTGGAGGCAATGTTTATCAGCAGCCACAGCATGGACAGATGAACTGGCCCAGTAACTATTGA 2538 0.4456 MSSVGSKVMIPNSLKMTIQNIKEITGNHSDEDIFTMLKECSMDPNETTQKLLLQDTFHEVKRKKDRKKESLNNRESSELHWKSVPTARVGRGSRVIFSSQTSKDAGGSKTSCPEKDNGINQIAEKGAPTLPHLQETKKREKVSGTSLSISSRVTANGHHVVAAGPISVVDRSSVLSAGATSSSNNSSSSGAATSSSTVCFSSLDPVLEPSSDLRFPGPVGSIKWEVGGQQPPSEPSADWHPENKPSGVPEIGNSSTLGKNPGKAQESMKSHLTDLSQPTSTTTHGSYSTSRPSSNYGSRTHQLIGPQKAVSNKEWKPKATVTSCQGTVSIVPSQVTAVSGEATGQSVPSEEASSKLQKKLEDLHLPRHQHVILPHHIYVPESEKSKFSFGSLGANFGATTSHVTGPGSDKIAVNLSENPPNIEAAAEKPTTSSPDTVHVAVEEFPEHPQSPINVSENVSSGAVEGSSSVIEELNESKQDNTLQPQSHQYSVLPNSSNYSFGLMPPVLGTQLSQIENFESQACDSSRLHSFVVHQSFDPASYYAQLYSSGPDSDGCVSPFAASGVNAKYNGNVTVLPAPNSHCPQEGGILSTAGPVPLVSQAAGLMQSSVAVTQQSVPVFRPPTGVHISHYPANYIPYGHYISPFYVPPPAIHQFLGNGAFPQQPQVSTVYPALPAITATGIKYSLPYKPGTNGGNPPHIVMPTAYGPYGSSSAGYNPSSTATAGNSNSNEDLGASVFKENNFYGQQQSEGSAVWVAAPGHEISSLPTSSFYHLPPQGQQMPFTPAQAGHGTFAGIYNPAQAVTAATIHPLLQQSQTMAGAVDMVGSGGNVYQQPQHGQMNWPSNY* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00380 845 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 845 IPR044277 -
Pte8g00380 845 MobiDBLite consensus disorder prediction 61 76 - -
Pte8g00380 845 MobiDBLite consensus disorder prediction 448 487 - -
Pte8g00380 845 Pfam GBF-interacting protein 1 N-terminal 10 69 IPR009719 -
Pte8g00380 845 SUPERFAMILY UBA-like 10 72 IPR009060 GO:0005515
Pte8g00380 845 MobiDBLite consensus disorder prediction 450 487 - -
Pte8g00380 845 MobiDBLite consensus disorder prediction 93 117 - -
Pte8g00380 845 MobiDBLite consensus disorder prediction 61 147 - -
Pte8g00380 845 MobiDBLite consensus disorder prediction 248 307 - -
Pte8g00380 845 MobiDBLite consensus disorder prediction 211 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00380 Pte-Chr8 12610839 12620803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00380 - - gmx:100809372 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00380 8 12610839 12620803 Pte8g00380 8 12610839 12620803 RCT