Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00085 ATGGTAGAGAGTTTTGATTTGTTCAGCAAACTCCCTGACTCATTGCTGTTTACCATTCTTTCATTTATGCCTGCACTGAAAGATGCTGCTATGGTAGGCATGGTGTCCAAGCGGTGGCTCAGAATATGGTTAGCCAGTTCAAGCATGGATTTCAAGGAGGAGAGCTTTGTGGGTCGGAGTATTAAACAAGACAAGATAACTGTACATGTTCGAAGGCAACTTTTCGTGGATTTCATGAAGAGATGGCTTTTGAAGTTGGATGGTTTTGTTGTAGGCAGTTGCAGTTTCAACCTGTCAAGACCGAAAGAATTTGAAGCAGATATGAAGACTTGTGTGAGTTCCGTCGTACGAAAAAGGGTCAGTGGACTAGCCCTAGATTTTTCTGAACCATCGTGGGAAAACGATAACTCCGATCACGATGAGGATCTGTTTGAATTGCCTTCCATTGTCTACCATAGACAAAGGCCTCTCGACTCATTGAAGTTGTTCTCATGTGGCTTTAGTAGAGCTTGTTTCATCACGAACTTGTCCACTTCACTGAAGCATGTTGCTTTGGGTTACATTAAACTTGAAACTGATTTTCTTAGGGTTTTCTTGGACAAATGTGAAATGCTCGAGAGTCTTAGTCTGAAGAGGTGCACTAATCTCCAACATTTTGAGATTCGTAAACCAATGCAGAGATTACAAAGTTTGGTGCTTGACAGATGTGTCTTCGATGAAGCTTCCTTGGTGATTAAGGCACCAAAACTCAAGTCCTTCAAGTACTCTGGGGTACTGGCCAATTTTGAGATGGAGATAGATGAAGATCACATGGAAGAGGCTGATCTTGATTTTGAGCTTGAACCTGATGAGTTTTACGAGACTGACTGTCTTTACAATCTCCTCGATTCTCTATATCCCGTCAAGGTTTTGACTGTATGCAGTTACTTTCTCCAGGTTATTAGTTCTGGAGAAGAATCCTCAGGCTTATCAGAGGCGATGTTTGTGGAGCACTTAACGATAAAAACTGACTTACATCCGAATGATTTTTATGGAATAAAGTTTCTTCTTCGAAGTTGTCCCTATTTGGAGATCCTGACAATCGAGCTTGGCCATGGAAGAATCCTCTCTGCTTATTCACCACCATTATCTCTCAATGCAACAACATTCTGGGAAGACTATTTACTGCTAGACGGAATATTTGTCGACAAGTGCTTGAGGCAAACACTCAAGGAAGTTAGAGTGAAGGGGTTTAGAGGGACAGCAGATCAAGTACGAATGCTAGGGTTTCTGATAAGAACTGGAAAAGTATTGGAGAGGATGATCATCTATCTGGCAATAGGTTTGGATGGACATGGCCGAAATATTCATCTATTTGCAGAAGTAGCACAATCTCTGCGTTCAGTGCAAGCTGCTTCGAACAAGCTTTCGATCTTTGTCTGTCTTTGA 1428 0.4181 MVESFDLFSKLPDSLLFTILSFMPALKDAAMVGMVSKRWLRIWLASSSMDFKEESFVGRSIKQDKITVHVRRQLFVDFMKRWLLKLDGFVVGSCSFNLSRPKEFEADMKTCVSSVVRKRVSGLALDFSEPSWENDNSDHDEDLFELPSIVYHRQRPLDSLKLFSCGFSRACFITNLSTSLKHVALGYIKLETDFLRVFLDKCEMLESLSLKRCTNLQHFEIRKPMQRLQSLVLDRCVFDEASLVIKAPKLKSFKYSGVLANFEMEIDEDHMEEADLDFELEPDEFYETDCLYNLLDSLYPVKVLTVCSYFLQVISSGEESSGLSEAMFVEHLTIKTDLHPNDFYGIKFLLRSCPYLEILTIELGHGRILSAYSPPLSLNATTFWEDYLLLDGIFVDKCLRQTLKEVRVKGFRGTADQVRMLGFLIRTGKVLERMIIYLAIGLDGHGRNIHLFAEVAQSLRSVQAASNKLSIFVCL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00085 475 SUPERFAMILY RNI-like 156 359 - -
Pte8g00085 475 Pfam FBD 397 436 IPR006566 -
Pte8g00085 475 SUPERFAMILY F-box domain 4 47 IPR036047 GO:0005515
Pte8g00085 475 Gene3D Ribonuclease Inhibitor 102 418 IPR032675 -
Pte8g00085 475 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 7 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00085 Pte-Chr8 1739022 1741205 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00085 - - jre:108983135 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00085 8 1739022 1741205 Pte8g00085 8 1739022 1741205 RCT