Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00080 ATGCAAATAGTTGAGATTTGCTTGGCAACAAGACCCCACAATGGAGGGCTAATAAACCTACTGGAGCTTTGCAGTCTACTTCGCCAGAAATGGAAAACCAGCCGTGATTCTGTTTCTGAGGAGGATTGCTTGCGAGCTATTAGTAAGCTTAAGGTGCTTGGTAATGGTTTTGAAGTGATATCTGCTGGAAAAAGAAAGCTAGTGCAGTCTGTTCCATCGGAGTTTAAAAAAGACCACAATGAAATATTAGAAGTTGCTCAGGTTATAGTTGATTTCTTTTCCTTTTTCCTTGAACTTGAAGGACTTGCAATGATCGATGATGGATATAGAGATGGTAAGCGAAGGTATTGGTTCCCTTGCGTATCTGCTATCTCATCAACAGCTGGAGCTGATACGCAAAATTCAACATTCTGGTTCAGATAA 423 0.4066 MQIVEICLATRPHNGGLINLLELCSLLRQKWKTSRDSVSEEDCLRAISKLKVLGNGFEVISAGKRKLVQSVPSEFKKDHNEILEVAQVIVDFFSFFLELEGLAMIDDGYRDGKRRYWFPCVSAISSTAGADTQNSTFWFR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00080 140 Gene3D - 1 71 IPR036388 -
Pte8g00080 140 SUPERFAMILY "Winged helix" DNA-binding domain 2 74 IPR036390 -
Pte8g00080 140 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 87 IPR016689 GO:0000814|GO:0071985
Pte8g00080 140 Pfam EAP30/Vps36 family 2 92 IPR040608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00080 Pte-Chr8 1593478 1595166 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00080 K12188 - mnt:21400801 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00080 8 1593478 1595166 Pte8g00080 8 1593478 1595166 RCT