Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00070 ATGGGTTGCAGAAACAGAGAGATTTTCTTGGAAGAAGATTGTACCGGTCCTTCTTCATTGAGTGAGGCCTTACTGTTCGCTACCATATGTCTAATCGGTATGCCTGTTGACGTGCACGTTAAGGATGGTTCTGTATACTCTGGAATCTTCCATACCGCATCCGGCGAAAAAGATTACGGTATTGTCTTGAAGAAAGCAAGGATGACAAAGAAGGGTAAAAGTGATGCAAATGTTGCCAAAGCGGGTACCATAGAGACACTGGTAATCTTATCAGGGGATCTCGTTCAAGTTGTTGCCAAGGGCGTGTTGTTTCCGGCTGATGGTCCTATGGGAAATGTGGCTGGCGGTGTTGTGGAACCTATTGATACCAGTGTGCCTTATCCAGTGAGTTCAATGTCAGAGTCTGAGAGATCTACACCTGCATTGATGGAAAGTCTGCATGTGACTCATGAACGGTCTTCCCACCCAACTGAAAATGGATTTCTCCCTGTTTCGTCATGTATGACTGTTGATAATGAGCATAAGAGAAGGCAACCAAAAACTTTGCAGATAGGAAAGCATATGGAAGTTGAAAATGGAAAAACAAATGAGACTAACTTGGCAAACATGAAGATTGGAGAAGTCTTCAGGCCACTGATAAATGAGAGACAGGCTGGAGATTATACATTGATAGCACAAAAAGACGAGTACAAACATAAGTTCGAATCAAGTGAAGTGAACAATGCATCTAAAATTGGAGAAGATGATGCAACCTATGCAGTGACTGCCAGCATTCCCAAAGGAGAACCAGTTGACAATGGACATCCAGATTTGATTTCAAAGTTCCAAGTAAATGGAGCATGCAATGGTAATCATCCTCCAGCACCTCCTAAACCAAACATTCATTCTCGTGAAATCACTCTGGCAGGATGTAGTTCAACAGATACTGTTACCCTAGATGTTTCATCTTCAAATCAAGCTGCAAATGGTGGCCCAAATTCCTTCCACGAGTCACCCGCTAAATTTGAGACAGGGAATTCAAATTCTAATATAGGTGGAAAGGAATTCAAACTCAACCCTGGTGCCAAAATTTTCTCTCCATCTTTGGCAAATTCTATGTCAGCTACTCAAAGAGTACCTGCAGTGGCAAATATTGCGTATGTACCGAACAGTTCTCATTTCATGACAGTTCCTGCTCTTCAACCGGAAGTTGGATTTAGTCCCTATCAGCCTCCTCTTCCTGTTATTGGACATATGGGGCATAGGGCACAGGCAGTTAGATATGCTGGCAATTATAACTCCGTTCTAGCTGATCCTGCTTATTTGCATCCAACTGCCCCAGCTGTAATGGTTGGACGACTAGGGCAGCTTGTCTATGTACACGCAATACCTCCTGATTTGGTTCAAGGTGCAGCTTCCATCACTCCAGCATCTGCTCGCCCACTTTTGTCACCAAACCATGTTCAAATCCCGAAGCAGCATGGCCTGACTGGTCAAGTCATGCAGTATTTTGTGCCCCCAGCTGCGATAACAAGTGGCCTGCAACCTTTTCCTTTGCCAAGCGACGTCCCAGTATTGCAGCCTCCTTTTCCTCCTGGTCGGCCAATTCCAGTGCCTGGACCAAATGGTTTCTACGGCACCAAGTTGTGA 1629 0.4463 MGCRNREIFLEEDCTGPSSLSEALLFATICLIGMPVDVHVKDGSVYSGIFHTASGEKDYGIVLKKARMTKKGKSDANVAKAGTIETLVILSGDLVQVVAKGVLFPADGPMGNVAGGVVEPIDTSVPYPVSSMSESERSTPALMESLHVTHERSSHPTENGFLPVSSCMTVDNEHKRRQPKTLQIGKHMEVENGKTNETNLANMKIGEVFRPLINERQAGDYTLIAQKDEYKHKFESSEVNNASKIGEDDATYAVTASIPKGEPVDNGHPDLISKFQVNGACNGNHPPAPPKPNIHSREITLAGCSSTDTVTLDVSSSNQAANGGPNSFHESPAKFETGNSNSNIGGKEFKLNPGAKIFSPSLANSMSATQRVPAVANIAYVPNSSHFMTVPALQPEVGFSPYQPPLPVIGHMGHRAQAVRYAGNYNSVLADPAYLHPTAPAVMVGRLGQLVYVHAIPPDLVQGAASITPASARPLLSPNHVQIPKQHGLTGQVMQYFVPPAAITSGLQPFPLPSDVPVLQPPFPPGRPIPVPGPNGFYGTKL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00070 542 MobiDBLite consensus disorder prediction 523 542 - -
Pte8g00070 542 MobiDBLite consensus disorder prediction 318 346 - -
Pte8g00070 542 Pfam Ataxin 2 SM domain 22 100 IPR025852 -
Pte8g00070 542 PANTHER ATAXIN 2-RELATED 130 492 IPR045117 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00070 Pte-Chr8 1501294 1509158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00070 - - qsa:O6P43_013730 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00070 8 1501294 1509158 Pte8g00070 8 1501294 1509158 RCT