Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00054 ATGGGTCAGATCGTGAAGAGGAAGAAGAAGGGACGGCCATCTAAGGCAGATCTAGCTAGAAGAGATGGCCGTTCTCCGGTAAAGGAAGAGCCTGATGTAAGGCGGAGTTTAAGGCGGAGGAATGTCAAGTACAACATCGATTATGATGATTACTTGGATGAGGACGATGAGGATGAGGAAGAGGACCAGAGGAGCAGGCAGAAGCAGAAGAAGCTCAAGCTTGTGGTCAAGCTGAACCAGACTAGTACGGATGGGGATGATTCAGGGCATAGCCACCCGCGTTCTGGATCGCGTGGGGATCACGCGCATGTGTCGGAGGACGAAGAGAGTGTGCAGAAAAGTAGGGCGAAGAAGCGCAGAGGTTCAAACAATGATGAGGAAGATGATGACGAGGAAGATGACGGCATTAATAATAATGACAAAGCTGTGGACGATGACGCAGACGAAGTAGGAGATGACGACGATGACGATCGTGAAGATAATAATGGAATTAGCGAGCAGCGACAAGAAGTGAAGGTTAGGAAATTGGAATGTAAAGGGCTCCACTCCGTACCAGGGACTCCACCAAACCCACCTTCCGGGATTCCGCTTCCTGATAAAAAGACATTGGAGTTGATCCTTGATAAGCTTCAGAAGAAGGATACATATGGTGTGTATGCTGAGCCAGTTGATCCTGAAGAGCTTCCTGATTATCATGAAGTGATTGAACATCCAATGGACTTTGCTACCGTGAGGAAAAAGCTAGGGAATGGATCATATTCTACTTTAGAACAATTTGAGGATGATGTATGTTTGATCTGCTCAAATGCAATGCAGTATAATGCAGCAGATACTATATACCATAAACAGGCACGTTCAATACAAGAGTTGGCAAGGAAAAAGTTTGAAAGAATAAGGTTTGACTTTGAGCGGTCTGAGAAAGAGGCGAAATCTGATCAAAAAACAAGGTCCACTCCATTGTCCAAGAAGCCACTAAAGAAGCCAGTCTATCATACGTCACAAGAGCCAGTTGGTTCTGACTTCTCTTCAGGTGCAACTCTTGCAACTCCTGGGGATTTACTGCCCGGTTCTAATCTAATTCAATTTGGTAGCTGTGAGCGGCCTCTTAACAATGATGGTCTCCTGGAGGGTAATACGTCATTTACTGATGCAAATATGGAGAAGCCTGAAGATGCTTTATTAGGGAAGAGTCTACTGAACAAACTAGGAAGAAAAGCAGTCGTGCATGAAGATGAACGACGCGCAACTTATAACTTATCTAATCAACCAGTCGTCAGATCAGAATCAGTATTTGCAATGTTAGAGGGTGAAATAAAGCAGCTGGTTGCTGTTGGGTTGCATGTTGAGTACTCCTATGGAAGGAGTCTTGCTCGTTTTGCTGCAACTCTCGAACCAGTTGCTTGGAAAATTACCTCTCAAAGGATTCGCCAGGCATTACATACTGGTGTTAAGTTTGGACGTGGGTGGGTTGGGGAGTATGAACCACCTCCAATTTCTGCGTTTTTGTTTCAAAGCCATTCCGAGCAATATTTCTGTATGAATACAGGGTTCCAATCCACTACTGAGTCGAGAAATGGTGAGAAAATATGTCAAATTCAGACCCCTGCCCAGCAGGCTGCTTGCCCTGTCGAGCTAAGAAATGGTGAGCAACTAGGTCAAACTCATGTCCCTGCTCAACGGCACACTGTCAAGGTACTACCATTAGAAGTGCAATAG 1716 0.4528 MGQIVKRKKKGRPSKADLARRDGRSPVKEEPDVRRSLRRRNVKYNIDYDDYLDEDDEDEEEDQRSRQKQKKLKLVVKLNQTSTDGDDSGHSHPRSGSRGDHAHVSEDEESVQKSRAKKRRGSNNDEEDDDEEDDGINNNDKAVDDDADEVGDDDDDDREDNNGISEQRQEVKVRKLECKGLHSVPGTPPNPPSGIPLPDKKTLELILDKLQKKDTYGVYAEPVDPEELPDYHEVIEHPMDFATVRKKLGNGSYSTLEQFEDDVCLICSNAMQYNAADTIYHKQARSIQELARKKFERIRFDFERSEKEAKSDQKTRSTPLSKKPLKKPVYHTSQEPVGSDFSSGATLATPGDLLPGSNLIQFGSCERPLNNDGLLEGNTSFTDANMEKPEDALLGKSLLNKLGRKAVVHEDERRATYNLSNQPVVRSESVFAMLEGEIKQLVAVGLHVEYSYGRSLARFAATLEPVAWKITSQRIRQALHTGVKFGRGWVGEYEPPPISAFLFQSHSEQYFCMNTGFQSTTESRNGEKICQIQTPAQQAACPVELRNGEQLGQTHVPAQRHTVKVLPLEVQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00054 571 PRINTS Bromodomain signature 228 244 IPR001487 GO:0005515
Pte8g00054 571 PRINTS Bromodomain signature 244 262 IPR001487 GO:0005515
Pte8g00054 571 PRINTS Bromodomain signature 262 281 IPR001487 GO:0005515
Pte8g00054 571 MobiDBLite consensus disorder prediction 306 344 - -
Pte8g00054 571 SUPERFAMILY Bromodomain 185 298 IPR036427 GO:0005515
Pte8g00054 571 Pfam Bromodomain 205 285 IPR001487 GO:0005515
Pte8g00054 571 MobiDBLite consensus disorder prediction 126 160 - -
Pte8g00054 571 ProSitePatterns Bromodomain signature. 217 273 IPR018359 -
Pte8g00054 571 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 526 - -
Pte8g00054 571 Gene3D - 198 320 IPR036427 GO:0005515
Pte8g00054 571 ProSiteProfiles Bromodomain profile. 211 281 IPR001487 GO:0005515
Pte8g00054 571 SMART bromo_6 192 300 IPR001487 GO:0005515
Pte8g00054 571 MobiDBLite consensus disorder prediction 1 173 - -
Pte8g00054 571 MobiDBLite consensus disorder prediction 15 48 - -
Pte8g00054 571 CDD Bromodomain 199 295 - -
Pte8g00054 571 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00054 Pte-Chr8 1204415 1208976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00054 K22184 - qsa:O6P43_021182 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00054 8 1204415 1208976 Pte8g00054 8 1204415 1208976 RCT