Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00051 ATGTTGGGTGTTGCTAGGCGAAGGGTTGCTAGTTGCAGCTCACCGCGTTTGTTTTCAGGACATACATTGCAGACGCTTAGGCCATCGGGTTCTTCTTCTTCGAGATATTCCTCTGTAGTGCTGAAGGAGATTGTATTTTGTGCTGGAGGACATGGTAAAATTCGGTATCTATCTCAATTGGTTCCAACTGGTGCCCAGTCAAGTTCAACAGCAATGAGGAGTACCCAATTTAACAACCAAAGAGCTGTGACAATGCAAATGTGGAGCAGATCCTTTTCTTCAGACACAGGAGATTTGGTCGATGTTGTCGTCCCTCCTTTGGCGGAGTCCATTTCTGATGGCACTCTGGCAAAATTTTTGAAAAAGCCTGGTGATAGTGTTAAAGTTGATGAACTAATTGCTCAAATTGAAACGGATAAGGTGACAATTGATGTTACTAGTCCAGATTCTGGTGTAATTCAGAAGTTACTAGCAAATGAAGGTGATACCGTCGAACCTGGGAACAAGATTGCTATCATTTCAAGGTCTGCTGATGCAAGTCATGTAGCGCCATCTGAGGGTACTTCTCAGAAAGCCGCTGAGCCAACTCCGTCTTCTGGAGAGGTTAGTGAGGGGAAAGAAAAGAAATCACCTGTGGTTGAGAAGCCTAAAGTTGACATCTCCCCAGAGAAGCCCAAATCTCCCACCCCACCTCATCGCTCGGCTACTGAACCTCAGCTTCCCCCTAAGGAGAGAGAGAGACGGGTTCCCATGACGAGACTCAGGAAGCGGGTAGCCACACGCTTGAAGGACTCTCAAAACACATTTGCTTTACTCACAACATTCAATGAAGTTGATATGACCAATTTGATGAAGCTCCGTTCAGACTACAAGGATGCTTTCGTTGAAAAACATGGTGTTAAGTTGGGTCTAATGTCGGGATTCGTTAAGGCTGCTGTTAGTGCACTACTACATCAGCCAATTGTTAATGCTGTGATTGATGGGGATGACATCATATACAGAGATTATGTAGACATTAGCATTGCTGTTGGCACTCCAAAGGGCCTTGTTGTGCCAGTTCTCCGTGATGCCGAAAAAATGAACTTTGCGGATATAGAGAAAGGGATTAATGCTCTTGCGGCAAAAGCAATAAATGGAACCTTATCTATTGACGAGATGGCTGGAGGCTCGTTTACCATATCCAATGGCGGTGTCTACGGTAGCCTTCTGAGTACCCCTATCATCAATCCTCCACAGTCGGCAATCTTGGGCATGCACTCAATTATGACCCGACCAATGGTAGTTGGAGGAAATGTCGTCCCAAGGCCAATGATGTACATTGCTCTGACATATGACCATAGGCTAATTGATGGAAGAGAGGCTGTTTTCTTTCTGCGTCGTATTAAGGATGTTGTAGAGGACCCTCGCAGGCTGCTTCTCGACATATGA 1428 0.4552 MLGVARRRVASCSSPRLFSGHTLQTLRPSGSSSSRYSSVVLKEIVFCAGGHGKIRYLSQLVPTGAQSSSTAMRSTQFNNQRAVTMQMWSRSFSSDTGDLVDVVVPPLAESISDGTLAKFLKKPGDSVKVDELIAQIETDKVTIDVTSPDSGVIQKLLANEGDTVEPGNKIAIISRSADASHVAPSEGTSQKAAEPTPSSGEVSEGKEKKSPVVEKPKVDISPEKPKSPTPPHRSATEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFVEKHGVKLGLMSGFVKAAVSALLHQPIVNAVIDGDDIIYRDYVDISIAVGTPKGLVVPVLRDAEKMNFADIEKGINALAAKAINGTLSIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIMTRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00051 475 ProSiteProfiles Biotinyl/lipoyl domain profile. 99 174 IPR000089 -
Pte8g00051 475 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 IPR003016 -
Pte8g00051 475 CDD lipoyl_domain 100 173 - -
Pte8g00051 475 MobiDBLite consensus disorder prediction 176 251 - -
Pte8g00051 475 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 238 473 - -
Pte8g00051 475 MobiDBLite consensus disorder prediction 181 197 - -
Pte8g00051 475 MobiDBLite consensus disorder prediction 201 222 - -
Pte8g00051 475 Pfam Biotin-requiring enzyme 101 173 IPR000089 -
Pte8g00051 475 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 60 474 - -
Pte8g00051 475 Gene3D - 232 471 IPR023213 -
Pte8g00051 475 NCBIfam dihydrolipoyllysine-residue succinyltransferase 189 474 IPR006255 GO:0004149|GO:0006099|GO:0045252
Pte8g00051 475 SUPERFAMILY CoA-dependent acyltransferases 245 474 - -
Pte8g00051 475 Gene3D - 99 176 - -
Pte8g00051 475 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 245 473 IPR001078 GO:0016746
Pte8g00051 475 MobiDBLite consensus disorder prediction 223 237 - -
Pte8g00051 475 SUPERFAMILY Single hybrid motif 99 185 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00051 Pte-Chr8 1177828 1184232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00051 16 473 Acyl Lipid Metabolism Gene Families AT1G54220 27.481 1.93e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00051 K00658 - qsa:O6P43_013686 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00051 8 1177828 1184232 Pte8g00051 8 1177828 1184232 RCT