Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00017 ATGCCTGAGACTGAGACAGAAAGTGATGGCAGTACTGCTTTACAGCAACCTCGTACTGTGGTAAGGAAATTCTTGGCTAGACCTCAACATGAAGGCGTCGGTGCCATTGTTAGAAGAAGTATAGGAAGGTTTGAGCTCAAGTATTTTGATCCTTTCCTTGCTTTGGATGAATTCTCAGTGACTGCACCAGCTGGTTTTCCAGATCATCCTCACAGAGGATTTGAGACTGTTACGTACATGTTGCAGGGATCTGTGACACACGAAGATTTTGAAGGGCATAAGGGTACGATTGCAGCGGGTGATCTGCAATGGATGACTGCAGGTAGAGGGATGGTTCACTCAGAGATGCCTGCAGCTCAGGGTACACAAAAGGGTCTCCAATTGTGGATCAATCTGTCTTCCAAATATAAAATGGTCGAACCAAATTATCAAGAAATGTTGAGCAAGGACATTGCAGAAGCTGCGAAAGATGGGGTGAAGGTTAGAGTGGTAGCCGGGCAAGCATTGGGGAAAAGCTCACCCATCTACACAAGGACTCCAACCATGTATCTGGACTTCATAATGAAACCGGGAGCCTCACTTGAACAACCAATACCCACGTCTTGGAATGCTTTTGTCTATGTGTTAGAGGGGGAAGGCGTGTTTGGAAATGCCAAGTCTCAGCCTGTAACTCCTCACCATCTTCTGCTTCTTGCTTCTGGTGATGGTTTGGCTGCATGGAACAAGTCCTCCAAGTTACTTAGGTTTATTTTAGTTGGAGGGGAACCACTGGGTGAACCTATCGTGCAATATGGAACTTTTGTGATGAACACTCAGGAAGAGATAGATCAGACTATGGATGATTTTGAAAATTATGTCAATGGGTTTGAGAAAGCCAAACATTGGAGATCTACCTCTGCAATGGATCTTCATTTTTAG 918 0.4488 MPETETESDGSTALQQPRTVVRKFLARPQHEGVGAIVRRSIGRFELKYFDPFLALDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIAAGDLQWMTAGRGMVHSEMPAAQGTQKGLQLWINLSSKYKMVEPNYQEMLSKDIAEAAKDGVKVRVVAGQALGKSSPIYTRTPTMYLDFIMKPGASLEQPIPTSWNAFVYVLEGEGVFGNAKSQPVTPHHLLLLASGDGLAAWNKSSKLLRFILVGGEPLGEPIVQYGTFVMNTQEEIDQTMDDFENYVNGFEKAKHWRSTSAMDLHF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00017 305 CDD cupin_pirin_C 180 256 - -
Pte8g00017 305 Pfam Pirin C-terminal cupin domain 183 285 IPR008778 -
Pte8g00017 305 Gene3D Jelly Rolls 31 283 IPR014710 -
Pte8g00017 305 Pfam Pirin 38 130 IPR003829 -
Pte8g00017 305 SUPERFAMILY RmlC-like cupins 18 297 IPR011051 -
Pte8g00017 305 CDD cupin_pirin_N 37 132 - -
Pte8g00017 305 PIRSF Pirin 16 296 IPR012093 -
Pte8g00017 305 PANTHER PIRIN-RELATED 12 299 IPR012093 -
Pte8g00017 305 FunFam pirin 31 168 - -
Pte8g00017 305 Gene3D Jelly Rolls 152 257 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00017 Pte-Chr8 485229 487706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00017 17 293 Calmodulin-binding Proteins AT3G59220 56.631 1.93e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g00017 K06911 - zju:107404287 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00017 8 485229 487706 Pte8g00017 8 485229 487706 RCT