Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g01084 ATGAATCAGGAAATGAATGGTGTTGAAGAACAGAAGAGGCAAGAAAATGGGGTTGAGAAAATTGATTATGTCTTCAAAGTGGTGGTGATAGGTGACTCAGCAGTAGGAAAAACTCAGATACTCTCGAGGTTTGCCAAGGATGAGTTCTGCTTTGATTCAAAGTCAACGATTGGAGTTGAGTTTCAAACCAGGACTGTTACCATTCAAGACAAGGTCATTAAAGCACAGATCTGGGACACTGCTGGGCAAGAAAGGTACCGTGCAGTGACGAGTGCATATTACAGAGGTGCCTTGGGTGCCATGCTGGTGTACGACATCACAAAGAGGCAGTCCTTTGATCATGTAGCAAGGTGGGTGGATGAGCTTCGAGCACATGCAGACAACTCCATTGTGATTATGCTGGCTGGAAATAAAGCTGACCTAGTGGACTTGAGGGCAGTGGATGCAGAAGACGCAGTGGAGTTTGCTGAGGAACAAGGTCTGTTTTTCTGTGAGACATCAGCTCGGAGTGGTGACAATGTGGACAAAGCGTTTTGCAGACTGTTGGAAGAGATTTATGGTGTAGTTTCTAAAAAGGCATTGGAGTGTAGTAATGAGAAGATGAATGGCTGTGATGTTATCATCAAGCTTAAAGGTTCCAGGATGGATCACATGATTTCCGGTTCTGATCATGATCTGGAAATCACTCAGATCAAGAAATTATCGTCTTGCTCTTGTTGA 720 0.4417 MNQEMNGVEEQKRQENGVEKIDYVFKVVVIGDSAVGKTQILSRFAKDEFCFDSKSTIGVEFQTRTVTIQDKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADNSIVIMLAGNKADLVDLRAVDAEDAVEFAEEQGLFFCETSARSGDNVDKAFCRLLEEIYGVVSKKALECSNEKMNGCDVIIKLKGSRMDHMISGSDHDLEITQIKKLSSCSC* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g01084 239 ProSiteProfiles small GTPase Rab1 family profile. 20 237 - -
Pte7g01084 239 PRINTS Transforming protein P21 ras signature 163 185 - -
Pte7g01084 239 PRINTS Transforming protein P21 ras signature 66 88 - -
Pte7g01084 239 PRINTS Transforming protein P21 ras signature 128 141 - -
Pte7g01084 239 PRINTS Transforming protein P21 ras signature 48 64 - -
Pte7g01084 239 PRINTS Transforming protein P21 ras signature 25 46 - -
Pte7g01084 239 Pfam Ras family 26 186 IPR001806 GO:0003924|GO:0005525
Pte7g01084 239 PANTHER DRAB11-RELATED 20 197 - -
Pte7g01084 239 Gene3D - 18 211 IPR027417 -
Pte7g01084 239 ProSiteProfiles small GTPase Ras family profile. 19 229 IPR001806 GO:0003924|GO:0005525
Pte7g01084 239 SMART rab_sub_5 25 188 - -
Pte7g01084 239 CDD Rab11_like 22 186 - -
Pte7g01084 239 ProSiteProfiles small GTPase Rho family profile. 18 197 - -
Pte7g01084 239 FunFam Ras-related protein RABA3 17 209 - -
Pte7g01084 239 SMART ras_sub_4 22 188 - -
Pte7g01084 239 NCBIfam small GTP-binding protein domain 24 178 IPR005225 GO:0005525
Pte7g01084 239 SMART ran_sub_2 30 226 - -
Pte7g01084 239 SMART rho_sub_3 27 185 IPR001806 GO:0003924|GO:0005525
Pte7g01084 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g01084 Pte-Chr7 35403211 35404918 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g01084 K07904 - tcc:18613929 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g01084 7 35403211 35404918 Pte7g01084 7 35403211 35404918 RCT