Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00066 ATGAACTCCGGGACATGCAGATGGGACCGATTTATGAGAATACTGGTTGCAACACTGACAGTCACTGTCGTTAGGGCTGAAATTGCCAGTGACAACTACGTAAGACCTTCCCCTCGTGAAACGCTTCTATTTCCATGGAGTCGCAAGCCTCCTTCCGAGCCACAACAGGTGCACATCTCTTTAGCAGGAGATAAGCACATGAGAATTTCCTGGATAACTGATGGTGGAAATTCTCCTTCATTTGTCGAGTATGGAACATCACCTGGGACATATCTTGATGTATCTCAAGGTGATGCTACATCTTATAAGTATTTGCTATATAGATCAGGAAAGATACACCACGCTGTAATTGGGCCTTTGGAGCATAACACTGTCTACTATTACCGGTGTGGGGGACTAGGTCCCGAGTTCCAGCTCAAGACTCCTCCAGCTCAATTTCCAATTACTTTTTCTGTGGCTGGGGATCTAGGCCAAACGGGCTGGACTAAGTCGACACTGGATCATATTGACATATGTAAATATGATGTCCATCTGCTTCCAGGAGATCTTTCATATGCTGATTACATTCAAAGCAGGTGGGACACATTTGGTGAGTTGGTGCAGCCTCTGGCTAGTGCAAGGCCATGGATGGTTACACAAGGAAACCACGAAAAAGAACACATTCCATTGTTAGAGGATGCATTTCAATCTTATAATGCTAGATGGAGGATGCCATTTGAAGAGAGTGGATCAACTTCAAATCTTTACTATTCCTTTGAGGTTGCAGGAGTTCATGTGATTATGCTTGGCTCGTATACTGATTATGATGAGTACTCAGACCAATACCAGTGGCTGAAGGCTGATTTGTCAAGTGTAGAGCGAGAAAAAACTCCTTGGTTATTTGTGTTGTTTCATGTGCCATGGTATAACAGCAACAAGGCTCATCTGGGTGAAGGGAGTGATATGATGGCAGCTCTGGAGCCATTACTTTATGCTGCTGGCGTCGATGTCATACTGGCTGGCCATGTGCATGCTTATGAAAGATCTAAACGTGTAAACAATGGGAAAACAGATCCATGTGGTGCTGTCCACATAACCATTGGTGATGGAGGAAATAGAGAAGGCTTAGCTCACAGGTATATAAATCCACAGCCAGAGTGGTCAGCCTTCCGGGAAGCTAGCTTTGGTCACGGTGAGCTTAAGGTAGTTAACTCCACTCATACCTTTTGGAGTTGGCATAGGAATGACGACGATGAACCAGTCAAGTCTGATGAAGTCTGGATAACTTCACTGGTTAGTTCAGGATGTGTTGCTCAGGGACATGATCGTAGGAAGAAAATTATCTTATTCGACTGA 1335 0.4449 MNSGTCRWDRFMRILVATLTVTVVRAEIASDNYVRPSPRETLLFPWSRKPPSEPQQVHISLAGDKHMRISWITDGGNSPSFVEYGTSPGTYLDVSQGDATSYKYLLYRSGKIHHAVIGPLEHNTVYYYRCGGLGPEFQLKTPPAQFPITFSVAGDLGQTGWTKSTLDHIDICKYDVHLLPGDLSYADYIQSRWDTFGELVQPLASARPWMVTQGNHEKEHIPLLEDAFQSYNARWRMPFEESGSTSNLYYSFEVAGVHVIMLGSYTDYDEYSDQYQWLKADLSSVEREKTPWLFVLFHVPWYNSNKAHLGEGSDMMAALEPLLYAAGVDVILAGHVHAYERSKRVNNGKTDPCGAVHITIGDGGNREGLAHRYINPQPEWSAFREASFGHGELKVVNSTHTFWSWHRNDDDEPVKSDEVWITSLVSSGCVAQGHDRRKKIILFD* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00066 444 Coils Coil 268 288 - -
Pte4g00066 444 Pfam Calcineurin-like phosphoesterase 152 339 IPR004843 GO:0016787
Pte4g00066 444 Gene3D - 53 144 - -
Pte4g00066 444 Gene3D - 145 428 IPR029052 -
Pte4g00066 444 Pfam Purple acid Phosphatase, N-terminal domain 54 132 IPR015914 GO:0003993|GO:0046872
Pte4g00066 444 CDD MPP_PAPs 145 423 IPR041792 -
Pte4g00066 444 PANTHER ACID PHOSPHATASE RELATED 17 422 IPR039331 GO:0003993
Pte4g00066 444 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 143 IPR008963 GO:0003993|GO:0046872
Pte4g00066 444 Pfam Iron/zinc purple acid phosphatase-like protein C 355 411 IPR025733 -
Pte4g00066 444 SUPERFAMILY Metallo-dependent phosphatases 147 414 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00066 Pte-Chr4 1107134 1110500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00066 54 440 Miscellaneous Gene Families AT1G13900 27.826 1.19e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00066 K22390 - tcc:18593556 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00066 4 1107134 1110500 Pte4g00066 4 1107134 1110500 RCT