Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00020 ATGGCTCCAGTGCGTGATGATGTTGCTGTCATGAAGCTTGAGAAAGTGTTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCTAACAATTCTCAAGCACAGGCAAGGCATGCTCAATCTCTGATTCATCTTCTCAAAGAAACACTAGATGGGATTAAGCTTAACACAACAGCTGACATCCCCTTTGCGATTGCTGACCTTGGATGTTCTTCAGGAAGAAACACTATTTATATAGTGGAAGTGATCATCCACCACATCAAGAATAGATATGAGGCCTTAGGTTTTCGGCCACCTGAGTTCTCTGCTTTCTTCAGTGACCTTCCTTGTAATGACTTCAACAACCTCTTTCAGCTTCTTCCTCCCAAAGCCAGCTGGGAAGTTAGCATGGAAGAATGCTTGAGTGCAAACAACCACCGCTCTTACTTTGCAGCCGGAGTTCCTGGTTCCTTCTACAAGAGGCTTTTTCCGGCTAGGTCAATTGATGTTTTCTATTCTGCATTTTCTTTGCATTGGCTCTCTCAGGTGCCAGAAGGTGTGCTGGACAGTGCTTCAAATGCCTACAACAAAGGAAGGGTGTTCATCCATGGTGCAGGTGAGAACACAGCCATTGCATACAAGAGACAATTTCAAGAAGACTTGAGAAGCTTTCTGAGATCAAGGTCACTAGAGATGAAAAAAGGAGGTTCCATATTCCTCATCTTCTTGGGGAGAACCTCAACAGACCCCACAGACCAAGGTGGGGCCGGCCTCCTCTTTGGGACCCACTTTCAAGATGCTTGGAATGATCTTGTCCAAGAGGGAGTGATTACGAGTGAGAAGCGAGACAATTTCAACATACCTGTGTATGCACCTAACCTGCAAGACTTCAAAGAGGTGGTGGAAGCAGATGGCTCCTTTGTCATAAACAAGCTTGAGGTAGTCAAAGGAGGAAGTCCATTGGTGGTGAACCAGCCAGATGATGCTACTGAAGTGGGCAGGGCTTTAGCCAATAGCTGCAGGAGTGTGGCTGGGGTCCTAGTTGATGCCCACATTGGTGACAAACTCAGTGATGAGCTCTTTATAAGAGTGCAAAAGAGAGCCACGGGCCATGCCAATGAGCTACTTGAGAAACTGCAGTTCTTCCATGTAGTTGCCTCCCTTTCTCTTGCTGGATAA 1158 0.4646 MAPVRDDVAVMKLEKVFSMKGGKGEASYANNSQAQARHAQSLIHLLKETLDGIKLNTTADIPFAIADLGCSSGRNTIYIVEVIIHHIKNRYEALGFRPPEFSAFFSDLPCNDFNNLFQLLPPKASWEVSMEECLSANNHRSYFAAGVPGSFYKRLFPARSIDVFYSAFSLHWLSQVPEGVLDSASNAYNKGRVFIHGAGENTAIAYKRQFQEDLRSFLRSRSLEMKKGGSIFLIFLGRTSTDPTDQGGAGLLFGTHFQDAWNDLVQEGVITSEKRDNFNIPVYAPNLQDFKEVVEADGSFVINKLEVVKGGSPLVVNQPDDATEVGRALANSCRSVAGVLVDAHIGDKLSDELFIRVQKRATGHANELLEKLQFFHVVASLSLAG* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00020 385 Gene3D Vaccinia Virus protein VP39 31 311 IPR029063 -
Pte4g00020 385 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 18 365 IPR005299 GO:0008168
Pte4g00020 385 Gene3D - 16 365 IPR042086 -
Pte4g00020 385 Pfam SAM dependent carboxyl methyltransferase 54 382 IPR005299 GO:0008168
Pte4g00020 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 382 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00020 Pte-Chr4 412287 414062 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00020 K18848 - cave:132175306 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00020 4 412287 414062 Pte4g00020 4 412287 414062 RCT