Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02282 ATGCTGAGATTCTTGAAAGCTAGGAAGTTTGACATTGAGAAAACTGTTCAGATGTGGGCTGATATGTTAATCTGGAGGAAAAATTACGGTGTTGATTCTATCATTGAGGATTTTAAATATGATGAGTATGAAGACGTCTTGTGCTATTATCCTCATGGTTTCCATGGAGTAGACAAACAAGGAAGACCAGTTTACATTGAAAGGCTTGGCAAAGTTGAGCCTGACAAGTTGATGAATGTCACTACTGTGGACAGGTTCTTAAAATACCATGTTCAGGGATTTGAGAAGATTTTCAGAGAGAGGTTTCCTGCGTGTTCTATTGCAGCCAAGAGACATATTGATAAAACAACTGCAATACTGGATGTTCATGGCGTGAACTGGGTGAGCTTCACCAAGGTTGCAAAGGATCTTGTAATGCGCATGCAAAAGCTTGATGGTGATAACTACCCTGAGACGCTACATCAGATGTTCATAGTTAATGCTGGCAGTGGGTTCAAGTTTGTTTGGAACACAGCAAAAAGCTTCCTTGACCCGAGGACTACAGGAAAGATACATGTTCTGGGCAGCAAATTTCAGAGCAGGCTGTTAGAACTTATTGACTCAAGCCAACTTCCAGATTTTCTTGGTGGAAATTGTTTGTGCCCAAATGGAGGATGCCTTAGATCTAACAAGGGACCTTGGAATGATCCTGATATAATGAAACTGGTATATTTTGGGCAGGAATTTCATCTATGTAATGACAAAAGCATTTCTGACAGTGATGAAAACAGTCTCAATTTATATGCCTTGCAGGGAAGAGTAGATGACTCTGCACCAAATTGCCATCCAGCTGGGGCAGCTGCTGCTGCTTCTGTTCAGGAGATTGGTTCGGCCAGCTCCTCAATTAATCTTCAGAAAAGAACTTTTTTCAAAGAGTTCATTCCCTGCTTAGCAAGTTCTGTGCTTTGTATTATACTCAAAATTTTGACTTGTATATACTCGGTATTCCCTGTCTTGGAGAGAATTTCTGTGGTGAGGAGAGCAGAGTCACAGCTGACAGGCCACCACCAAGCTCAATTATTTGAATCAGAATCTCAACGACAACTAATCTCTCATGCAATAACAGAGGAAAAAATTTATAGTAGGTTGCAGAAATTAGAAATATCGGTGACAGGCTTAATGGATAAGCATACAAAAATACCTCCTGAGAAAGAGAGCATACTTCTTGAGTCACTGAGTCGCATTACTTCAATAGAGCATGACCTTCAAAAGACGAAGGCTATACTTGAAACGACCTCAAAGCAAGTTGAGCTTGCTGAGTCATTAGAAATTCTCAAAGACAGTACTCTTAATCTATCCAAGTCCATGGCCCCCTTGGTATTCCTTGGGGGGGAATTTTCGGTCTTGGCTAGTTTTGTGGGGTCAGATATGTAA 1413 0.4091 MLRFLKARKFDIEKTVQMWADMLIWRKNYGVDSIIEDFKYDEYEDVLCYYPHGFHGVDKQGRPVYIERLGKVEPDKLMNVTTVDRFLKYHVQGFEKIFRERFPACSIAAKRHIDKTTAILDVHGVNWVSFTKVAKDLVMRMQKLDGDNYPETLHQMFIVNAGSGFKFVWNTAKSFLDPRTTGKIHVLGSKFQSRLLELIDSSQLPDFLGGNCLCPNGGCLRSNKGPWNDPDIMKLVYFGQEFHLCNDKSISDSDENSLNLYALQGRVDDSAPNCHPAGAAAAASVQEIGSASSSINLQKRTFFKEFIPCLASSVLCIILKILTCIYSVFPVLERISVVRRAESQLTGHHQAQLFESESQRQLISHAITEEKIYSRLQKLEISVTGLMDKHTKIPPEKESILLESLSRITSIEHDLQKTKAILETTSKQVELAESLEILKDSTLNLSKSMAPLVFLGGEFSVLASFVGSDM* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02282 470 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 1 436 - -
Pte3g02282 470 SMART sec14_4 42 213 IPR001251 -
Pte3g02282 470 CDD SEC14 43 211 IPR001251 -
Pte3g02282 470 SUPERFAMILY CRAL/TRIO N-terminal domain 1 38 IPR036273 -
Pte3g02282 470 Gene3D - 30 237 IPR036865 -
Pte3g02282 470 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 42 216 IPR001251 -
Pte3g02282 470 Pfam CRAL/TRIO domain 50 210 IPR001251 -
Pte3g02282 470 SUPERFAMILY CRAL/TRIO domain 41 238 IPR036865 -
Pte3g02282 470 Gene3D - 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02282 Pte-Chr3 41586877 41594980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02282 3 207 Acyl Lipid Metabolism Gene Families AT5G47730 30.918 7.43e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02282 K26544 - qsa:O6P43_016861 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g02282 3 41586877 41594980 Pte3g02282 3 41586877 41594980 RCT