Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01964 ATGGTTCGGAAAACTAAAGGGATTATTTTGAGTGTCGTATTCTTTCTTTTGTTGTTTGCTATTTTCCCACTCTGTTTCTCAGCTATCACAAATCCTCTGAGAAAGAAAAAGCCTACCCAACCTGCGGCTGTTAATGGCTTCTCAACTTTATTCCGGGTTCAAGGAAACGTTTATCCCATTGGGTACTACTATGTATCTCTCAGCATCGGCAGTCCTCCCAAGGTTTACGATCTGGATATTGACTCAGGCAGTGATCTAACTTGGGTTCAATGCGATGCTCCTTGTACCGGTTGCACAAAGCCTCGTGAGAGTCTGTATAAGCCAAACAGAAACCTGGTGACTTGTTTAGACCAGGTTTGTTCTGCAATCCATCAATTGCCAAACCACAAGTGCAGTTCTCCAAATGATCAATGTGACTACGAGGTTGAATATGCAGACAGTGGATCATCCCTTGGTGTGCTAGTCAGGGACCAGGTTCCCCTTAGATTGAGAAATGGCTCTGTCATCGGCCCTCGGTTAGCCTTTGGATGCGGATATGATCATAAATTTTCGGGTCCAAACAGTCCACCTTCCACCGCTGGAGTCTTGGGCCTTGGGAATGGTAAAGCAAGTATCATCTCCCAGCTACGTGCCATGGGGCTGGCAAGGAATGTTATTGGTCACTGTTTCAGTGGACAAGGAGGTGGGTATTTGTTCATTGGAGATGAAATTGTCCCTTCCACTGGAATTTCTTGGACGCCAATCTTGCCGAGTTCCTTGGAGAAGCACTATGCGGCTGGACCAGCTGACATTGTTTTTGGCGGACAACCTACTAGTATAAAGGGTGTCAACGTTATTTTTGACAGCGGAAGCTCCTATACATATTTTAATTCCCAAATCTACAAATCGATAGTTGATCTGATCACTAATAATTTGAAGGGAAAGCAATTGACAAATGCACCTCAAGATGGAACTCTTTCAGTCTGCTGGAAGGGCTCAAAAGCTTTCCGATCCCTAAAGGACGTTACCAGCTATTTCCAGCCTCTAGTGTTGACTTTTACAAAGTCGAAGAATGTCCAGTTGCAACTACCACCTGAAAATTATCTCATCATTTCAGTGAGCAACTCTTAA 1110 0.4432 MVRKTKGIILSVVFFLLLFAIFPLCFSAITNPLRKKKPTQPAAVNGFSTLFRVQGNVYPIGYYYVSLSIGSPPKVYDLDIDSGSDLTWVQCDAPCTGCTKPRESLYKPNRNLVTCLDQVCSAIHQLPNHKCSSPNDQCDYEVEYADSGSSLGVLVRDQVPLRLRNGSVIGPRLAFGCGYDHKFSGPNSPPSTAGVLGLGNGKASIISQLRAMGLARNVIGHCFSGQGGGYLFIGDEIVPSTGISWTPILPSSLEKHYAAGPADIVFGGQPTSIKGVNVIFDSGSSYTYFNSQIYKSIVDLITNNLKGKQLTNAPQDGTLSVCWKGSKAFRSLKDVTSYFQPLVLTFTKSKNVQLQLPPENYLIISVSNS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01964 369 SUPERFAMILY Acid proteases 55 365 IPR021109 -
Pte3g01964 369 Gene3D Acid Proteases 235 369 IPR021109 -
Pte3g01964 369 Pfam Xylanase inhibitor N-terminal 63 235 IPR032861 -
Pte3g01964 369 FunFam Aspartyl protease family protein 39 235 - -
Pte3g01964 369 Gene3D Acid Proteases 43 234 IPR021109 -
Pte3g01964 369 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 278 289 IPR001969 GO:0004190|GO:0006508
Pte3g01964 369 Pfam Xylanase inhibitor C-terminal 275 362 IPR032799 -
Pte3g01964 369 ProSiteProfiles Peptidase family A1 domain profile. 63 369 IPR033121 -
Pte3g01964 369 PANTHER ASPARTYL PROTEASES 55 363 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01964 Pte-Chr3 31428834 31433391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01964 20 365 Miscellaneous Gene Families AT1G44130 51.873 2.52e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01964 - - qsa:O6P43_019772 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01964 3 31428834 31433391 Pte3g01964 3 31428834 31433391 RCT